Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., DNA-binding transcriptional regulator CytR from Serratia liquefaciens MT49

 Score =  124 bits (310), Expect = 4e-33
 Identities = 85/312 (27%), Positives = 159/312 (50%), Gaps = 5/312 (1%)

Query: 1   MASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN 60
           MA++ DVA +AGVS +TVSR + +   V   T+ KV +AV   GY  + +++++K  ++ 
Sbjct: 9   MATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALSRNIKRNESR 68

Query: 61  LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV 120
            I VIVP +     A  + G+     Q G  VL+ +  Q + +E  ++ +   K+++G++
Sbjct: 69  TILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLIITKQIDGML 128

Query: 121 FYATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIG 180
              ++L        Q +  P+V+  +      +P++  D+    FEA   L + G KQI 
Sbjct: 129 LLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLHQLGHKQIA 188

Query: 181 FIGVQSDDIAVDVLRSQGLQQAL---GFHQQTLLFHARGNFSIESGYQMAKQAYLDYPQL 237
            +    + + +   R QG  QAL   G   ++  +  RG+F+ E+G Q            
Sbjct: 189 CV-AGPEQMPLSHYRLQGYIQALRRNGISVES-SYITRGDFTYEAGAQALAALMAQPKPP 246

Query: 238 DGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGEN 297
             +FC +D +A+G +   +++G+ V Q + ++G  + +LA   +PPL+T      + G+ 
Sbjct: 247 TAVFCHSDVMAIGVLSQAKKMGLRVPQDLSIVGFDDIKLAQYCDPPLTTVAQPRYQIGQQ 306

Query: 298 AAKMLLERIAGR 309
           A  +LLE++ G+
Sbjct: 307 AMLLLLEQLHGQ 318