Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., Trehalose operon transcriptional repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  124 bits (311), Expect = 3e-33
 Identities = 90/310 (29%), Positives = 156/310 (50%), Gaps = 16/310 (5%)

Query: 3   SLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLI 62
           ++ D+ARL+GV KSTVSRV+N+E GV E T+ +V   + Q G+  ++ A+ ++ Q   ++
Sbjct: 6   TIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQSDKVV 65

Query: 63  GVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFY 122
            +IV R+ S +    V  +   F + G   ++  +       +E++ +  ++ ++G+V +
Sbjct: 66  AIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPTLVMEHLGMLRRRNIDGVVLF 125

Query: 123 A-THLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIGF 181
             T + + L+   + S   +VL+ +D       S+ +DD        QRL + G + I F
Sbjct: 126 GFTGITEELIAPWKAS---LVLLARDAQ--GFASVCYDDEGAIHILMQRLYEQGHRNISF 180

Query: 182 IGVQSDDIAVDVLRSQGLQQALGFHQQTLL--FHARGNFSIESGYQMAKQAYLDYPQLDG 239
           +GV   DI     R       L F ++  L    A    +++ GY+      +  P    
Sbjct: 181 LGVPHSDITTGKRRHDAY---LAFCKKHKLHPVAALPGLAMKQGYEHTASVIM--PDTTA 235

Query: 240 LFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENAA 299
           L CATD LA+GA K LQE  +   + ++L  VGN  L    +P + T +  + +AG  AA
Sbjct: 236 LVCATDTLALGASKYLQEQRI---ETLQLASVGNTPLIKFLHPEIVTVDPGYAEAGRQAA 292

Query: 300 KMLLERIAGR 309
             L+E+I GR
Sbjct: 293 SQLIEQINGR 302