Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., Transcriptional regulator, LacI family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  114 bits (285), Expect = 4e-30
 Identities = 93/332 (28%), Positives = 156/332 (46%), Gaps = 16/332 (4%)

Query: 3   SLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLI 62
           +L DVAR AG+S  TVSR +N    V+  T  KV++AV   GY+ N +A  L S+++ LI
Sbjct: 28  TLEDVARSAGLSPMTVSRALNSPQLVRPKTVEKVMQAVRVTGYIPNALAGGLASRRSKLI 87

Query: 63  GVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFY 122
            V+VP+++++     +  L+    + G H+LL         E E +     +R +G+V  
Sbjct: 88  AVVVPQINNNMFVDTIQSLSDELARRGYHILLCVAGYTEQTEAELVATLLSRRPDGVVLT 147

Query: 123 ATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDH-RVGFEAGQRLVKAGCKQIGF 181
             H    L   I ++A+PVV +  D +   +  +V   H +VG   G+ L+  G ++ G 
Sbjct: 148 GIHHTIELKKVILNAAIPVVEI-WDLTPTPLDMLVGFSHEKVGQATGEYLLSKGYRRPGL 206

Query: 182 IGVQSDDIAVDVLRSQGLQQALGFHQQTLLFHARGNF------SIESGYQMAKQAYLDYP 235
           +       A    R QGL   L  H      HA          S+  G     Q + D  
Sbjct: 207 LWTADRRAA---QRKQGLCSVLQRH----AIHAVPQVDVPLPASLSLGRSGLSQLF-DEG 258

Query: 236 QLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAG 295
             D + C++D LA GA+   +  G+ +   + ++G G+ + A  + P ++T +      G
Sbjct: 259 TFDVIVCSSDTLAQGAMMEAESRGLRIPHDLAVIGFGDLDFAASNRPSITTVSVDRRAIG 318

Query: 296 ENAAKMLLERIAGRGQEMSKVVLTFQNIQRET 327
           + AA +L +RI  +    + V + F  I RE+
Sbjct: 319 QRAATLLADRIEQKPCAEAIVDIGFHLIGRES 350