Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., trehalose repressor (NCBI) from Escherichia coli BW25113

 Score =  118 bits (296), Expect = 2e-31
 Identities = 83/316 (26%), Positives = 155/316 (49%), Gaps = 12/316 (3%)

Query: 3   SLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLI 62
           ++ D+ARL+GV KSTVSRV+N+E GV + T+ +V   + Q G+  ++ A+ ++ Q   ++
Sbjct: 6   TIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQSDKVV 65

Query: 63  GVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFY 122
            +IV R+ S +    V  +   F + G   ++  +        E++ +  ++ ++G+V +
Sbjct: 66  AIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLF 125

Query: 123 A-THLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIGF 181
             T + + +   + H    +VL+ +D       S+ +DD        QRL   G + I +
Sbjct: 126 GFTGITEEM---LAHWQSSLVLLARDAK--GFASVCYDDEGAIKILMQRLYDQGHRNISY 180

Query: 182 IGVQSDDIAVDVLRSQGLQQALGFHQQTLLFHARGNFSIESGYQMAKQAYLDYPQLDGLF 241
           +GV   D+     R +        H+   +    G  +++ GY+    A +  P+   L 
Sbjct: 181 LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPG-LAMKQGYE--NVAKVITPETTALL 237

Query: 242 CATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENAAKM 301
           CATD LA+GA K LQE  +     ++L  VGN  L    +P + T +  + +AG  AA  
Sbjct: 238 CATDTLALGASKYLQEQRI---DTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQ 294

Query: 302 LLERIAGRGQEMSKVV 317
           L+ ++ GR +    ++
Sbjct: 295 LIAQVTGRSEPQQIII 310