Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., trehalose operon repressor, proteobacterial from Enterobacter asburiae PDN3

 Score =  125 bits (314), Expect = 1e-33
 Identities = 91/317 (28%), Positives = 160/317 (50%), Gaps = 14/317 (4%)

Query: 3   SLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLI 62
           ++ D+ARL+GV KSTVSRV+N+E GV E T+ +V   + Q G+  ++ A+ ++ Q   ++
Sbjct: 6   TIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQSDKVV 65

Query: 63  GVIVPRVSSHATAQGVDG-LTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVF 121
            +IV R+ S +    V   L A +EQ    +++ +   V   E E++ +  ++ ++G+V 
Sbjct: 66  AIIVSRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSVQLVE-EHLGMLQRRNIDGVVL 124

Query: 122 YA-THLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIG 180
           +  T +   ++   Q S   +VL+ +D   +   S+ +DD        QRL   G + I 
Sbjct: 125 FGFTGIKDEMLKPWQPS---LVLLARDA--HGFASVCYDDEGAIITLMQRLFDEGHRHIS 179

Query: 181 FIGVQSDDIAVDVLRSQGLQQALGFHQQTLLFHARGNFSIESGYQMAKQAYLDYPQLDGL 240
           F+GV   D+     R +        H  + +    G   ++ GY+    A +  PQ   L
Sbjct: 180 FLGVPHADVTTGKRRHEAYLAFCKSHNLSAVASLPG-LGMKQGYEQV--ASVLTPQTTAL 236

Query: 241 FCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENAAK 300
            CATD LA+GA K LQE  +     +++  VG+  L    +P + T +  + ++G  AA 
Sbjct: 237 VCATDTLALGASKYLQEQRI---DSLQVASVGSTPLMKFLHPEIITVDPGYAESGRQAAA 293

Query: 301 MLLERIAGRGQEMSKVV 317
            L+E+I GR +    V+
Sbjct: 294 QLIEQINGRSEPRQIVI 310