Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., ribose operon transcriptional repressor RbsR from Escherichia coli ECRC62

 Score =  119 bits (297), Expect = 1e-31
 Identities = 92/324 (28%), Positives = 163/324 (50%), Gaps = 8/324 (2%)

Query: 1   MASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN 60
           +A++ DVARLAGVS STVS VIN +  V E+   KV  A+++  Y  + +A+ LK  +T+
Sbjct: 1   LATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTH 60

Query: 61  LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV 120
            IG+++   ++   ++ V G+     + G  ++L NT     +    ++   QKRV+G++
Sbjct: 61  TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLL 120

Query: 121 FYATHLDQPLVHAIQ-HSAVPVVLVGQDGSLYNIPS-IVHDDHRVGFE-AGQRLVKAGCK 177
              T   QP    +Q +  VP V++  D + ++  S ++ D+  +G + A Q L+  G  
Sbjct: 121 LLCTETHQPSREIMQRYPTVPTVMM--DWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHT 178

Query: 178 QIGFIGVQSDDIAVDVLRSQGLQQALGFHQQTLL--FHARGNFSIESGYQMAKQAYLDYP 235
           +I  I    D      LR +G + A+     ++   +   G+F    G+   +Q      
Sbjct: 179 RIACITGPLDKTPAR-LRLEGYRAAMKRAGLSIPDGYEVTGDFEFNGGFDAMRQLLSHPL 237

Query: 236 QLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAG 295
           +   +F   D +AVG  +AL +  + V Q + ++G  + ELA    PPL+T +   D+ G
Sbjct: 238 RPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELG 297

Query: 296 ENAAKMLLERIAGRGQEMSKVVLT 319
           E A  +L+ RI     +  ++ LT
Sbjct: 298 ELAIDVLIHRITQPTLQQQRLQLT 321