Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., gluconate operon transcriptional repressor GntR from Escherichia coli ECRC62

 Score =  117 bits (294), Expect = 3e-31
 Identities = 81/309 (26%), Positives = 155/309 (50%), Gaps = 9/309 (2%)

Query: 4   LHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLIG 63
           L DVA   GV+K TVSR + +   V  + + K+  A+++ GY+ N+    L +  +  IG
Sbjct: 8   LQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSNATSRAIG 67

Query: 64  VIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFYA 123
           V++P +++   A+ + G+ ++ +  G   +LA+       E E ++      ++G++   
Sbjct: 68  VLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNIDGLILTE 127

Query: 124 -THLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIGFI 182
            TH  + L   I+ + +PVV +    S     ++  D+     +    ++  G + I ++
Sbjct: 128 RTHTPRTL-KMIEVAGIPVVELMDSQSPCLDIAVGFDNFEAARQMTTAIIARGHRHIAYL 186

Query: 183 GVQSDDIAVDVLRSQGLQQAL---GFHQQTLLFHARGNFSIESGYQMAKQAYLDYPQLDG 239
           G + D+  +  ++ +G +QA+   G    +++     ++S  SG ++ +QA  +YPQLDG
Sbjct: 187 GARLDERTI--IKQKGYEQAMLDAGLVPYSVMVEQSSSYS--SGIELIRQARREYPQLDG 242

Query: 240 LFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENAA 299
           +FC  D LAVGA    Q LG+ V   + + G    ++  V  P L++     ++ G   A
Sbjct: 243 VFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSIGA 302

Query: 300 KMLLERIAG 308
           + LL RI G
Sbjct: 303 ERLLARIRG 311