Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., HTH-type transcriptional repressor CytR from Escherichia fergusonii Becca

 Score =  113 bits (282), Expect = 8e-30
 Identities = 84/312 (26%), Positives = 157/312 (50%), Gaps = 7/312 (2%)

Query: 2   ASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNL 61
           A++ DVA  A VS +TVSR + +   V ++T+ +V KA  + GY+   + +++K  ++  
Sbjct: 10  ATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRT 69

Query: 62  IGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVF 121
           I VIVP +     ++ + G+       G  VL+ +    + +E  +I +   K+++G++ 
Sbjct: 70  ILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLL 129

Query: 122 YATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIGF 181
             + L        Q +  P+V+  +      +P++  D+    F+A   L + G  +IG 
Sbjct: 130 LGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHNRIGC 189

Query: 182 IGVQSDDIAVDVLRSQGLQQAL---GFHQQTLLFHARGNFSIESGYQMAKQAYLDYPQ-L 237
           I    +++ +   R QG  QAL   G       + ARG+F+ E+G   A Q  LD PQ  
Sbjct: 190 I-AGPEEMPLCHYRLQGYVQALRRCGIMVDP-QYIARGDFTFEAG-SKAMQQLLDLPQPP 246

Query: 238 DGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGEN 297
             +FC +D +A+GA+   +  G+ V + + ++G  N +L    +PPL+T      + G  
Sbjct: 247 TAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGRE 306

Query: 298 AAKMLLERIAGR 309
           A  +LL+++ G+
Sbjct: 307 AMLLLLDQMQGQ 318