Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., LacI family DNA-binding transcriptional regulator from Dickeya dadantii 3937

 Score =  120 bits (301), Expect = 5e-32
 Identities = 99/328 (30%), Positives = 158/328 (48%), Gaps = 8/328 (2%)

Query: 3   SLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLI 62
           +L DVAR AG+S  TVSR +N    V+  T  KV +AV   GY+ N +A  L S+++ LI
Sbjct: 17  TLDDVARAAGLSSMTVSRALNTPALVRAKTIEKVQEAVRATGYIPNALAGGLASRRSKLI 76

Query: 63  GVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFY 122
            V+VP+++++     +  L+    + G H+LL         E E +     +R +G+V  
Sbjct: 77  AVVVPQINNNMFVDTIQALSDELARRGYHMLLCVAGYTQQAEEELVATLLSRRPDGVVLT 136

Query: 123 ATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDH-RVGFEAGQRLVKAGCKQIGF 181
             H    L   I ++AVPVV +  D +   +  +V   H +VG    + + + G ++ G 
Sbjct: 137 GIHHSPALKKIILNAAVPVVEI-WDLTPTPLDMLVGFSHEKVGMTIAEYIRRKGYQRPGL 195

Query: 182 IGVQSDDIAVDVLRSQGLQQALGFHQQTL--LFHARGNFSIESGYQMAKQAYLDYPQLDG 239
           I       A    R  GL +AL  H   L     A    ++  G     Q  L+  Q D 
Sbjct: 196 IWTADPRAA---RRKTGLCEALSGHGVPLPACIDAPLPATLAFGRHGLSQ-LLEQNQPDV 251

Query: 240 LFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENAA 299
           + C++D LA GAI   +  G+ V Q + ++G G+ + A  + P L+T      + G  AA
Sbjct: 252 VVCSSDTLAQGAIMEAESRGLRVPQDLAVMGFGDLDFAASNRPALTTVGIDRREMGRRAA 311

Query: 300 KMLLERIAGRGQEMSKVVLTFQNIQRET 327
            +L + IAG     + V + FQ I+RE+
Sbjct: 312 TLLADSIAGDTHSDAIVDIGFQLIERES 339