Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., sugar-binding domain protein from Bacteroides ovatus ATCC 8483

 Score =  124 bits (312), Expect = 3e-33
 Identities = 84/314 (26%), Positives = 161/314 (51%), Gaps = 17/314 (5%)

Query: 3   SLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLI 62
           ++ D+AR   +S STVSR + ++  +++ TK +VL+  +  GY  N VA +LK   TN +
Sbjct: 5   TIKDIARHLSLSVSTVSRALINDKNIRQETKERVLETAKMLGYKPNPVATNLKYGHTNTV 64

Query: 63  GVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVF- 121
           GVIVP + +   +Q + G+ ++    G  V++A + +   KE E +Q   +  V+GI+  
Sbjct: 65  GVIVPEMLTPFASQVISGIQSVLYANGIKVIIAESDEDPNKERENLQTMERFMVDGIIIC 124

Query: 122 ---YATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQ 178
              Y  +LDQ +   +Q + +P+V   +     N+  ++ DD+   F   + L++ G + 
Sbjct: 125 LCSYKENLDQYI--RLQQAEMPMVFYDRIPYGMNVSQVIVDDYIKAFFLVEHLIREGYRH 182

Query: 179 IGFIGVQS-DDIAVDVLRSQGLQQALG-----FHQQTLLFHARGNFSIESGYQMAKQAYL 232
           I  + +Q  DD+   V R++G + AL      F++  +L   +   + + G   A     
Sbjct: 183 I--VHLQGPDDVYNSVERARGYKDALAKFNIPFNKDRML---KAGLTFKDGANAADMLIE 237

Query: 233 DYPQLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFD 292
                D +F  TD LA+GA+  L++LG  + +++ +       L+ +  P L+T      
Sbjct: 238 KGISFDAIFAFTDTLAIGAMNRLRDLGKKIPEEIAIASFSGTVLSTIVYPQLTTVEPPLQ 297

Query: 293 KAGENAAKMLLERI 306
           + G+  A++++E+I
Sbjct: 298 QMGKVVAELIIEKI 311