Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

 Score =  117 bits (292), Expect = 5e-31
 Identities = 81/329 (24%), Positives = 163/329 (49%), Gaps = 5/329 (1%)

Query: 3   SLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLI 62
           SL DVA+ AGVS +TVSR++N    +   TK ++  A+ +  Y+ N  A+ L   +++ I
Sbjct: 8   SLKDVAQAAGVSVATVSRLLNGTLELPSETKTRIETAIRELNYVPNPHARRLSRGRSDTI 67

Query: 63  GVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFY 122
           G++VP + +      V  +    ++ G  + L  T     +E+ Y+++  +  V+G+VF 
Sbjct: 68  GLVVPDIGNPFFGMLVAAVEEEADRRGLALSLFATLNRKGRELSYLRLLARNHVDGLVFI 127

Query: 123 ATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIGFI 182
             H +   +  + ++   VV+V +D     +P +  D+ + G  AG  L + G  ++ ++
Sbjct: 128 TNHPNTDELAELINTTGKVVVVDEDVPGATVPKLFCDNEQGGRLAGAHLAEHGHSRVLYV 187

Query: 183 GVQSDDIAVDVLRSQGLQQALGFHQ---QTLLFHARGNFSIESGYQMAKQAYLDYPQLDG 239
           G   D I+ +  R +G+  AL   +   +  +    G +++E G   A++   +      
Sbjct: 188 GGPEDMISTE-RRFRGMTSALAERKCEAELSITRYCGAYTVEFGRAAARRFLDEGRPATA 246

Query: 240 LFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENAA 299
           +F ++D +A+G ++ L+  GV + Q V ++G  +    ++  PPL+         G+ A 
Sbjct: 247 VFASSDEIAIGFVEVLRSEGVRIPQDVSMIGFDDVGPLHLFAPPLTAIRQPVSAIGQRAL 306

Query: 300 KMLLERIAGRG-QEMSKVVLTFQNIQRET 327
            +LLE     G   +S+ +L  + + RE+
Sbjct: 307 SLLLETNWDEGAPPLSEELLPVEIVVRES 335