Pairwise Alignments

Query, 479 a.a., PTS maltose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., PTS system, N-acetylglucosamine-specific IIC component / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.193) / PTS system, inactive IIB catalytic domain from Sphingobium sp. HT1-2

 Score = 48.9 bits (115), Expect = 4e-10
 Identities = 27/69 (39%), Positives = 47/69 (68%), Gaps = 3/69 (4%)

Query: 10  LLESLGGKSNIQALAHCATRLRLVLNDETQINESAIESLQGVKGQFKVA-GQYQIIFGSG 68
           ++ +LGGK+N++++  C TRLRLVL D T  +E+ + +L G +G  ++  G +Q++ G  
Sbjct: 404 MVAALGGKANVRSVDACTTRLRLVLGDSTIADEARLRAL-GARGVVRLRDGGFQVVLGP- 461

Query: 69  IVNQVYAEM 77
           I +QV AE+
Sbjct: 462 IADQVAAEI 470



 Score = 31.6 bits (70), Expect = 7e-05
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 17/118 (14%)

Query: 294 DALNWLYDSAGFVGGALFGFIYAPFVITGMHHSFIAIETQLLADI--------------V 339
           D L+    +AG +G  ++G +    +ITG+HH    +   LL D                
Sbjct: 182 DRLSQWVVAAGPLGLFVYGLLNRLLLITGLHHIINNVAWFLLGDFHGATGDIKRFFAGDP 241

Query: 340 TTGG--TFIFPIAAMSNIAQGAAALAVGVMTKETKLKGVAIPSGVTALL-GITEPAMF 394
           T GG  +  FP+      A   A     +  +  ++ G+ +   +T+ L G+TEP  F
Sbjct: 242 TAGGFMSGFFPVMMFGLPAACLAMYRTALPDRRKRVGGLLLSLALTSFLTGVTEPIEF 299