Pairwise Alignments

Query, 193 a.a., DedA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 50.1 bits (118), Expect = 3e-11
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 23/193 (11%)

Query: 11  LHSSSPFWVFLGIVVLSYLLEDVAIVTAAGLASQQLTPMPFALLAIFIGIATGDIALYYL 70
           LH    F +FLG    ++   +  +V A  LA +    +   ++  F G   GD   YY+
Sbjct: 6   LHDFGYFALFLG----TFFEGETILVLAGFLAFRGYMDINLVVVVAFFGSYAGDQLWYYM 61

Query: 71  GR-YSRYF--RAMRYRLLTNPYFRQVRRRLLARPFINLFTIRFIPGLRT---VGYTLSGY 124
           GR + R    R  R++L+ +     +RR     P I + + RF+ GLRT   V   LSGY
Sbjct: 62  GRKHGRKLLARKPRWQLMGDKALEHIRRH----PDIWVLSFRFVYGLRTVMPVAIGLSGY 117

Query: 125 VALPLRLFTAAVLMATALWTVVVFFAIYQLGS---QAWFQASEYRWWWLCLLVVL---LL 178
             L   +      +  A+W + +  A Y  G+          +Y  W L  L++L   L 
Sbjct: 118 PPLRYLILNG---IGAAIWALALGAAAYHFGAVLEGMLGSIKKYELWVLGALLLLGFGLW 174

Query: 179 VFNRVFSAKMIKE 191
           +  R+ +A++ +E
Sbjct: 175 LRRRIKNARIARE 187