Pairwise Alignments

Query, 193 a.a., DedA family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 189 a.a., DedA family inner membrane protein YohD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 48.5 bits (114), Expect = 7e-11
 Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)

Query: 24  VVLSYLLEDVAIVTAAGLASQQ-LTPMPFALLAIFIGIATGDIALYYLGR-YSRYFRAMR 81
           +V+  + E   +    G+A+ Q L   P    A+ +G   GD  LY LGR Y        
Sbjct: 15  LVIGSMAEGETVTLLGGVAAHQGLLKFPLVAAAVALGGMMGDQLLYLLGRCYGGKILRRF 74

Query: 82  YRLLTNPYFRQVRRRLLARPFINLFTIRFIPGLRTVGYTLSGYVALPLRLFTAAVLMATA 141
            R  T    R+ ++ +   P++ +   RF+ G R VG  L G   LP ++F    ++   
Sbjct: 75  PRYHTK--IRRAQKMIQRHPYLFVIGTRFMYGFRVVGPLLIGASRLPPKIFLPLNIVGAL 132

Query: 142 LWTVVVFFAIYQLGSQA---WFQASEY---RWWWLCLLVVLLL 178
           +W  ++F  +  LG +    W    +       WL L +VL++
Sbjct: 133 IW-ALLFTTLGYLGGEVIAPWLHDLDQHLRHGVWLILAIVLVV 174