Pairwise Alignments

Query, 378 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., no description from Variovorax sp. SCN45

 Score =  219 bits (558), Expect = 9e-62
 Identities = 135/353 (38%), Positives = 189/353 (53%), Gaps = 9/353 (2%)

Query: 29  RAISPFEFLPSWFCYAPVVVQSVLLGLYYRDLRLPLVANPTIYLSGMVGESKHDILSLAG 88
           R  S  E +P W    P+VVQ + L + +    +P  ANP +   G+VGE K +     G
Sbjct: 18  RECSLLERMPKWLICVPLVVQWLWLSVRHGGATVPSAANPNLTSGGLVGEGKLEYFEGMG 77

Query: 89  DQARRWISPFITCTV-NDLPLTEQVKAIEQRLHDADLRFPLVAKPDLGCRGVGVKLIQSH 147
             AR   +    C V ND   TE   A+ Q +  + L FPLV KP+LG  G GV+L+   
Sbjct: 78  PLARALTADH--CAVRNDDAATEP--ALRQTMERSGLGFPLVVKPNLGLCGYGVRLLHDM 133

Query: 148 EQLSEYLRRFPVQARFLLQQKAPYSAEAGIFYVRFPGDAQGQIISMTLKYAPSVMGDGVR 207
             L  YL  FP     +LQ+  P   EAGIFY R P   + +II + L+Y P V GDG  
Sbjct: 134 AALQAYLAVFPRDETVVLQRYLPQEGEAGIFYARDPVTDESRIIGLALRYFPRVTGDGRS 193

Query: 208 TLRELIHACPRSGQLAHLYLPRHPDKLDW--VVPDKQEFQLAFAGSHSRGSIFRNGNRYI 265
           T+ ELI A  R+ ++A    PRH  ++    V    Q  +LA  GS   G ++RNG    
Sbjct: 194 TVAELIAADTRARRIARS--PRHECRVPSGSVPAAGQHVRLATIGSTRVGGLYRNGAALA 251

Query: 266 TPALVEKLDAIFDDFPGFHYGRLDVKFSHIDALMRGDAFTILEVNGASSEATHIWDRETR 325
           TP LV  +DA+  D P FH+GR DV+F  +  L  G  FTI+E+NGA SEA   WD +  
Sbjct: 252 TPELVRAIDAVARDMPAFHFGRFDVRFDSLRELAAGRGFTIMEINGAGSEAIEAWDPDIG 311

Query: 326 LGEIFTTLLKQYRILYAIGAEQKKRGHKPPSLRALLRAWRQEKQLIQHYPETD 378
           + + F  +  + R+L+AIGA Q++ G +P  L AL R  R++ +L+  YP ++
Sbjct: 312 VLQGFRMIFAKQRLLFAIGAAQRRNGVRPIGLLALARLNRRQNRLVDRYPPSN 364