Pairwise Alignments

Query, 567 a.a., NADH oxidase from Vibrio cholerae E7946 ATCC 55056

Subject, 1328 a.a., nitrite reductase [NAD(P)H], large subunit/nitrite reductase [NAD(P)H], small subunit from Enterobacter asburiae PDN3

 Score =  134 bits (337), Expect = 2e-35
 Identities = 94/344 (27%), Positives = 165/344 (47%), Gaps = 38/344 (11%)

Query: 21  RRLSEDAEIIMFERGPYVSFANCGLPYHIGGDIKERSNLLLQTPES-FLARFNVDVRTMN 79
           R L +  +I++F    Y  +    L  + GG    RS   L   E  F A   +++R   
Sbjct: 421 RNLHQQYQIVVFGEERYAVYDRVHLSEYFGG----RSAASLSLVEGDFFADSGIELRLSQ 476

Query: 80  EVLRINRAAKTITVRNLLDQSEYDENYDFLLLSPGAGPVIPPIPGIQNPLTHSLRNIPDM 139
           +++ I+R A+ +        S ++ ++D L+L+ G+ P +PP+PG   P     R + D+
Sbjct: 477 QIVAIDRDARVVRTA-----SGHETHWDKLVLATGSYPFVPPVPGNDLPGCFVYRTLDDL 531

Query: 140 DKIIQTLQMNKPEHATVVGGGFIGLEMMEAFHHLGIKTTLIEMADQVMT-PVDREMAGFA 198
           DKI      ++     V+GGG +GLE   A   LG++T ++E A  +M   +D + A   
Sbjct: 532 DKIAAHAAGSR--RGVVIGGGLLGLEAANALKQLGLETHVVEFAPNLMAVQLDNDGAAML 589

Query: 199 HAEIRAKGIDLRLGAALKSVEYRPAATLPSAESGESLEHKHVEGELDLLLSNGDTLTTDI 258
             +  A G+ +    A   +     AT               +G L L  ++G+ L TD+
Sbjct: 590 RKKTEALGVGVHTSKATTEI-----AT--------------ADGGLVLRFADGEQLETDM 630

Query: 259 LIMAIGVRPETKLAAEAGLQLGELGGIWVNEQMQTSDPAIYAVGDAVEEKDFVTGKQTLV 318
           ++ + G+RP+  LA  +GL +GE GGI +++  QTSDP + A+G+    +  + G     
Sbjct: 631 VVFSAGIRPQDSLARSSGLAIGERGGICIDDGCQTSDPDVLAIGECALWEGKIFG----- 685

Query: 319 PLAGPANRQGRMAADNMLGRNESYQGTQGTAICKIFDLAVASTG 362
            L  P  +  R+AA  + G ++++ G   +   K+  + VAS G
Sbjct: 686 -LVAPGYQMARVAAAALAGEDKTFTGADMSTKLKLLGVDVASFG 728



 Score = 89.4 bits (220), Expect = 9e-22
 Identities = 93/370 (25%), Positives = 158/370 (42%), Gaps = 51/370 (13%)

Query: 3   KIVIIG-GVAGGASAAARARRLSEDAEIIMFERGPYVSFANCGLPYHIGGDIKERSNLLL 61
           ++VIIG G+A     A+   R +    I +    P  ++    L   +GG+ K+ +++ L
Sbjct: 2   RLVIIGNGMAATRLIASLTGRAAGRFAITVIGDEPEHAYNRIQLSPVLGGE-KQAADICL 60

Query: 62  QTPESFLARFNVDVRTMNEVLRINRAAKTI--TVRNLLDQSEYDENYDFLLLSPGAGPVI 119
           Q  + + AR  V V    + + +N  A+ +  T R L         +D L+ + G+ P +
Sbjct: 61  QDDDWYQAR-GVTVLRGEKAIAVNVDAREVQTTARTL--------GWDALVFATGSTPFV 111

Query: 120 PPIPGIQNPLTHSLRNIPDMDKIIQTLQMNKPEHATVVGGGFIGLEMMEAFHHLGIKTTL 179
           PP+PG   P   + R + D   I      +    A V+GGG +G+E   A   LG   TL
Sbjct: 112 PPVPGCDAPHVFTFRTLEDTRAI-----RSIAGPAVVLGGGVLGVETAAALARLGDNVTL 166

Query: 180 IEMADQVMTP-VDREMAGFAHAEIRAKGIDLRLGAALKSVEYRPAATLPSAESGESLEHK 238
           +     +M   +DR+        + A+G+   L + + +V            SG S+   
Sbjct: 167 VHRGPWLMEQQLDRQAGMLLEEALAARGVRCELASGIAAV------------SGNSVT-- 212

Query: 239 HVEGELDLLLSNGDTLTTDILIMAIGVRPETKLAAEAGLQLGELGGIWVNEQMQTSDPAI 298
                    L NG  +    +++A GV+P   LA  +G++     GI V+ QMQTS+P +
Sbjct: 213 ---------LLNGRRVAAARVVLATGVQPSIALAQASGIRCAR--GIVVDYQMQTSEPNV 261

Query: 299 YAVGDAVEEKDFVTGKQTLVPLAGPANRQGRMAADNMLG-RNESYQGTQGTAICKIFDLA 357
           YA+G+  E      G      L  P   Q  + A  + G     +  T      K+  + 
Sbjct: 262 YAIGECCEIDGQTFG------LVAPCLAQAEILAARLAGDATAPFTQTDSGMRLKVTGME 315

Query: 358 VASTGKNEKQ 367
           + S G+  +Q
Sbjct: 316 LFSLGRAAEQ 325