Pairwise Alignments

Query, 154 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 139 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  115 bits (288), Expect = 3e-31
 Identities = 55/128 (42%), Positives = 84/128 (65%), Gaps = 1/128 (0%)

Query: 7   LFRATSLVAGLLFGLGMVVSGMADPAKVIGFLDVAGTWDPSLMFVMGGALAIFMPAYFFL 66
           + + T+ +AGLLFGLG++++GMA+P KV+ FLD+AG WDPSL  VM GA+A+ +    + 
Sbjct: 1   MIKVTAFIAGLLFGLGLLLAGMANPTKVLAFLDIAGAWDPSLALVMIGAIAVAIGPLTWA 60

Query: 67  IKPKAKPVNAEVFCLANNTKIDRRLISGSVIFGLGWGLVGICPGPVVSSLALGNLGAWVF 126
            +     + A +  L     +DRRL+ GS++FG+GWG+ G+CPGP V+ L  G     +F
Sbjct: 61  RRHSRSLLGAPM-QLPAKRGLDRRLVGGSLLFGIGWGIAGVCPGPAVAILLTGQWQVILF 119

Query: 127 FPAMMVGL 134
             AM+ G+
Sbjct: 120 TVAMLGGM 127