Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  201 bits (511), Expect = 2e-56
 Identities = 122/298 (40%), Positives = 178/298 (59%), Gaps = 9/298 (3%)

Query: 41  DGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLASAT 100
           DGVV+ V Q ++ AQT+ RV  L  DVND V K  VL+  S V+Q +A  AA+AQLASA 
Sbjct: 55  DGVVEAVQQVTITAQTNARVRELPYDVNDVVAKGDVLVRFSDVEQQSARQAARAQLASAE 114

Query: 101 AQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYTNI 160
           A  +EAQA   R   ++ KG +S  QMD   A   +A AA+ +A+A +    + L YT +
Sbjct: 115 ASYKEAQASFGRIEAVYAKGYVSAAQMDQQRAARDAARAALDAARAQLANVGQQLDYTVL 174

Query: 161 TAPYDGIVTQRMVELGETVAPG----TPLLRGFSLDELRVETEIPQRYQPYVADVSQF-T 215
            AP+ GI+T+R V +GE V  G     PL++  +LD+LRV  ++P   Q  V  + QF +
Sbjct: 175 RAPFAGIITRRFVHVGEAVQAGPPSPQPLIQLQALDQLRVNVQVP---QSAVEAIRQFHS 231

Query: 216 VRTAQGE-QLKPVEFSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFNYGQREVLV 274
            +  +GE ++      +F YADPQ+HTF  RL LP ++  L PGM VK  F  G  + L+
Sbjct: 232 AQVLRGERRIAAGAVEVFPYADPQTHTFNVRLPLPADNGGLYPGMTVKVAFATGAAKRLL 291

Query: 275 VPSSAVLRRAELSAVYRVNNGQRALNPVRLGQVYGDYVEVLSGLELGDVVATQAVTAK 332
           +P+S ++RR EL  VY ++    +L  +R+G   GD+VE+L+GL+ G+ VA     A+
Sbjct: 292 LPASTLVRRGELVGVYALDAYGVSLRQLRIGPQDGDHVEILAGLDDGERVARDPQAAR 349