Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., Macrolide export protein MacA from Xanthobacter sp. DMC5

 Score = 93.6 bits (231), Expect = 8e-24
 Identities = 100/341 (29%), Positives = 155/341 (45%), Gaps = 51/341 (14%)

Query: 34  ISQIVELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQ 93
           + + V   G ++P N  ++ +Q SGR++ + V + D VKK  ++ +I +V Q  +L  A+
Sbjct: 68  LEETVLASGTLKPSNLVAVGSQASGRILSIKVKLGDEVKKGDLIAQIDSVTQENSLRTAE 127

Query: 94  AQLASATAQNREAQA-------QLNRYRQLFPKGAISKDQMDSAE-------ARARSADA 139
           A LA+  AQ  E +A        L R + +  + A+S+   ++A+       A+  + DA
Sbjct: 128 AALANTRAQKAEKEATLVLNEQTLARQKTMVAQKAVSQADFEAADSAVKVTRAQLAALDA 187

Query: 140 AVKSAQAAVEQAKESLGYTNITAPYDGIVTQRMVELGETV-----APGTPLLRGFSLDEL 194
            + SAQ AV+ A+ +LGYT ITAP DG V   + + G+T+     AP   +L    LD +
Sbjct: 188 QIISAQVAVDTARANLGYTQITAPVDGTVLALVAQQGQTLNATQTAPTVAILG--QLDVM 245

Query: 195 RVETEIPQRYQPYVADVSQ--FTVRTAQGEQ-------LKPVE--------FSLFSYADP 237
            V  EI +     VA      FTV  A  E+       ++P          FS  S +  
Sbjct: 246 MVRAEISEADIIKVAPGMPLWFTVVGAPDERHYAKLGFIEPAPESLKNDSIFSTTSSSSS 305

Query: 238 QSHTFKTR---------LELPQNSAALVPGMWVKTEFNYGQRE-VLVVPSSAVLRRAELS 287
            S +  T           ++P     L   M  +     G+ E VL VPS+A L RA   
Sbjct: 306 SSSSSSTTSSAIYYIGVFDVPNPKGRLRTYMTPEVHIILGRAENVLTVPSTA-LERAGKG 364

Query: 288 AVYRVNNGQRAL--NPVRLGQVYGDYVEVLSGLELGDVVAT 326
              RV +G   +   PV +G       E+ SGL  G+ V T
Sbjct: 365 WRVRVLHGDGTVERRPVEVGLNDKVTAEIRSGLAEGERVVT 405