Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 79/304 (25%), Positives = 147/304 (48%), Gaps = 35/304 (11%)

Query: 37  IVELDGVVQPVNQG-SLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQ 95
           ++E  G ++P NQG +L  +T+G +  +  +    V KDQ L+ + +  + A L + +A+
Sbjct: 57  VIEAIGFIEP-NQGVTLTTETAGVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEAR 115

Query: 96  LASATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESL 155
           L +A       +A+  RY+ LF KG+ISK+  D AEA   +  A ++S +A + + +   
Sbjct: 116 LPAA-------KAKYERYKGLFAKGSISKESYDEAEASYYALSADIESLKATIARRE--- 165

Query: 156 GYTNITAPYDGIVTQRMVELGETVAPGTPLLRGFSLDELRVETEIPQRYQPYVADVSQFT 215
               I AP+ G++  R V LG+ + PGT ++R      +R+   +PQR      D+S+ +
Sbjct: 166 ----IKAPFAGVIGIRNVFLGQYLQPGTDIVRLEDTSVMRLRFTVPQR------DISRIS 215

Query: 216 --------VRTAQGEQLKPVEFSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFNY 267
                   V        K    ++      QS   + + ++P +   L  GM+ +     
Sbjct: 216 LDQEVDIFVDAYPQTSFKGSISAIEPAVSVQSGLIQVQADIPNSDGKLRSGMFARANIIL 275

Query: 268 GQRE-VLVVPSSAVLRRAELSAVYRVN--NGQRAL--NPVRLGQVYGDYVEVLSGLELGD 322
            + E  + +P +A+        VY V+  NG++ +  + V++G+       +L G++ GD
Sbjct: 276 PKLENQVTLPQTAITYTLYGDNVYIVSEENGEKRVQQHVVKVGERSESIAHILEGVKPGD 335

Query: 323 VVAT 326
           VV T
Sbjct: 336 VVVT 339