Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

 Score =  106 bits (264), Expect = 1e-27
 Identities = 89/335 (26%), Positives = 158/335 (47%), Gaps = 13/335 (3%)

Query: 3   ALSWSIALVLASSAYAQNQDSNERFTV------KTELISQIVELDGVVQPVNQGSLAAQT 56
           AL   IA ++   + AQ    N +  V      + +  S +  L G ++   +  + A+ 
Sbjct: 47  ALRTVIANIVQGRSVAQMTQQNAKQYVDVVTPTQADGTSGVTVLPGTLRGYVESPIYARA 106

Query: 57  SGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLASATAQNREAQAQLNRYRQL 116
           +G ++  Y D+   VK+ Q+L E+   +    L  A AQ     +    A++   R++QL
Sbjct: 107 TGYLLHWYADIGARVKEGQLLAELDTPEIDQELAQAVAQRDQIQSSLGLAKSSFERWQQL 166

Query: 117 FPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYTNITAPYDGIVTQRMVELG 176
             + A+S+ ++D  ++      A + +A+A V++ ++   +  I AP+ G+VTQR V++G
Sbjct: 167 RQRDAVSQQELDERQSTYSQDVANLAAAEANVKRLRQLESFKRIVAPFAGVVTQRNVDVG 226

Query: 177 ETVAPGTPLLRG-FSL---DELRVETEIPQRYQPYVADVSQFTVRTAQ--GEQLKPVEFS 230
           + +  G+   R  F+L   D LRV  ++PQ Y   +       V  A+  G+Q      +
Sbjct: 227 DLIDAGSGTSRALFALAQSDPLRVYVQLPQAYAQNIKVGEDVVVTQAELPGQQFNGRITN 286

Query: 231 LFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFNYGQREVLVVPSSAVLRRAELSAVY 290
           +    D  + + +  + L      L PG +V+     G R  L VP +A+L RAE   + 
Sbjct: 287 ISGAIDVPTRSLQVEVTLRNPDGKLRPGAYVQVALPSGARAQLSVPGNALLFRAEGPRLA 346

Query: 291 RV-NNGQRALNPVRLGQVYGDYVEVLSGLELGDVV 324
            V N+G   L  V + Q  G  +E+ SG+E  D V
Sbjct: 347 VVDNDGVVHLRKVAIAQDLGQTLEIESGIEPNDRV 381