Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  129 bits (323), Expect = 2e-34
 Identities = 96/300 (32%), Positives = 139/300 (46%), Gaps = 13/300 (4%)

Query: 42  GVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLASATA 101
           G V P+ +  L  Q SG +  +YV+    VK+ Q L EI   +  A L  A+A L SA A
Sbjct: 58  GTVVPLQEVELRPQVSGYITNIYVEDGQRVKQGQKLYEIDQSKYQAGLQQARANLQSAKA 117

Query: 102 QNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYTNIT 161
                Q  L RY +L  + AI+K Q+D A    ++A A V SA+A V+ A   +GY  I 
Sbjct: 118 NLARVQKDLERYERLAERDAIAKQQVDYARTEVQTAKAQVASAEAQVQSASTDVGYAVIN 177

Query: 162 APYDGIVTQRMVELGETVAPGTPLLRGF-SLDELRVETEIPQRYQPYVADVSQ------- 213
           AP+ G +    V +G  V+PG PLL    S+D + V+  I ++  P    + Q       
Sbjct: 178 APFSGTIGISQVRVGAQVSPGQPLLNTISSMDPIAVDFAINEQEIPRFVKLQQGNQPDSL 237

Query: 214 FTVRTAQGEQLKPVEFSLFSY---ADPQSHTFKTRLELPQNSAALVPGMWVKTE-FNYGQ 269
           FT+    GE+  P    L +       QS T   R++ P  +A L+PGM V     N   
Sbjct: 238 FTLTLNNGEKY-PHNGKLLAIDRAIGRQSGTTTVRVQFPNPNAVLIPGMTVTVNVLNQDI 296

Query: 270 REVLVVPSSAVLRRAELSAVYRVNNGQRALNPVRLGQVYGDYVEVLSGLELGDVVATQAV 329
            + LV+P+ AV  +     VY V         V+LG      V V  GL+ G  +  + +
Sbjct: 297 GDQLVIPNKAVAEQLGEFYVYVVQGDSVVQQNVQLGTRVNGNVVVREGLKEGQQIVVEGI 356