Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., efflux RND transporter periplasmic adaptor subunit from Mucilaginibacter yixingensis YX-36 DSM 26809

 Score =  107 bits (268), Expect = 4e-28
 Identities = 85/298 (28%), Positives = 140/298 (46%), Gaps = 10/298 (3%)

Query: 39  ELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLAS 98
           +  G V  +N   L AQ SG + G++    + V+K + L EI   +  AA D AQA + +
Sbjct: 52  QYQGTVVALNSVELRAQVSGYITGIFFKEGEVVQKGKPLYEIDRRKYQAAYDQAQANVVT 111

Query: 99  ATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYT 158
           A A   +AQ  ++RY  L  + A+++  +D+AEA   +A + V  A+A +E A   L Y+
Sbjct: 112 AQANLVKAQKDIDRYNMLLKQDAVARQTVDNAEAVYAAAKSQVAVAKAGLESASTDLSYS 171

Query: 159 NITAPYDGIVTQRMVELGETVAPGTPLLRGFS------LDELRVETEIPQRY--QPYVAD 210
            I AP+ G +    V+LG  V PGT LL   S      +D +  E +I + Y  Q +  D
Sbjct: 172 VIKAPFTGRIGISQVKLGAQVTPGTTLLNTISSENPIGVDVVVNEQDISRFYKLQSHATD 231

Query: 211 VSQFTVRTAQGEQLKPVE-FSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTE-FNYG 268
            +   V +      KP + F++    + Q+ T K R++   +   L  GM    +  N  
Sbjct: 232 STFRLVLSDNTIYNKPGKIFAIDRGVNNQTGTIKVRVQFDNSQDVLKDGMSAALKVLNDD 291

Query: 269 QREVLVVPSSAVLRRAELSAVYRVNNGQRALNPVRLGQVYGDYVEVLSGLELGDVVAT 326
               +++P  AV  +     V++  +       + LG    D V V+ G+  GD + T
Sbjct: 292 SGHRVIIPYRAVTEQMGEFFVFKQQDTIALQKKITLGPRLKDSVVVMDGVTTGDKIIT 349