Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score =  111 bits (277), Expect = 3e-29
 Identities = 86/296 (29%), Positives = 137/296 (46%), Gaps = 3/296 (1%)

Query: 38  VELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLA 97
           +E  G +   ++ +L+ +T GR++   VD+ D V   Q+L  +        LD A A   
Sbjct: 72  LERTGEIHAHDETTLSFRTGGRILTRSVDIGDRVTAGQLLATLDNTTGQNQLDGAAADYE 131

Query: 98  SATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGY 157
            A A  + A   ++R ++L P GAI++ Q+DSA A    A A +KS++AA   A+ESLG+
Sbjct: 132 GAKASAQVAALNVSRMQKLMPTGAIARTQLDSARADWLVARARLKSSEAAWRNARESLGW 191

Query: 158 TNITAPYDGIVTQRMVELGETVAPGTPLLRGFSLDELRVETEI--PQRYQPYVADVSQFT 215
           T + AP  G++T      G+ V+ G  +L   + +   V  +I  P    P      + +
Sbjct: 192 TRLIAPQAGVITAVNASAGQVVSDGQSVLTLATGEARDVAFDIATPDAIPPLDKAFLRVS 251

Query: 216 VRTAQGEQLKPVEFSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFNYGQREVLVV 275
           + +    Q       +   ADPQ+ T++ R  L    AA+  G  V             +
Sbjct: 252 LLSDPSVQASAALRDITPQADPQTRTWRVRATLQNPPAAMALGASVTVTLPSSAPRGYTL 311

Query: 276 PSSAVLRRAELSAVYRVNNGQRA-LNPVRLGQVYGDYVEVLSGLELGDVVATQAVT 330
           P+SA+ R  +  AV+ +    RA L  V         V + SGLE GD V T  V+
Sbjct: 312 PASALTRVGDKPAVFVITPQSRAQLRAVVPASYTASSVMIASGLEPGDRVITAGVS 367