Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 18/300 (6%)

Query: 39  ELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLAS 98
           ++ G V    Q  LA +T GRV+   VDV   V+K QVL  +  +++ A +D AQA L S
Sbjct: 48  QISGEVTARFQADLAFRTEGRVIARLVDVGSRVQKGQVLARLDDIEKKADVDVAQATLHS 107

Query: 99  ATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYT 158
           A A  +  Q   +R ++L    AIS+ + D A     SA A V SAQ++++ AK++L YT
Sbjct: 108 ARATLQLKQRIFSRDQKLLTIHAISQAEWDQAREDLSSAQAGVVSAQSSLDTAKDALTYT 167

Query: 159 NITAPYDGIVTQRMVELGETVAPGTPLL---------RGFSLDELRVETEIPQRYQPYVA 209
            + +  DG++  R +E+G+ VA    +L           F + E  +  E P        
Sbjct: 168 ELKSDADGVIVSRQLEVGQVVASAQTVLTLAHDGPRDAVFDVPEAILLNEHPG------D 221

Query: 210 DVSQFTVRTAQGEQLKPVEFSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFNYGQ 269
           D+S   +    GE L      +    +  S T + +  LP  SA    G  V       +
Sbjct: 222 DISVRLISARDGEALTAKVREIAPMLNEASGTVQVKTTLPV-SAQWPLGASVVGNIVVNE 280

Query: 270 REVLVVPSSAVLRRAELSAVYRVNNGQR--ALNPVRLGQVYGDYVEVLSGLELGDVVATQ 327
           +  +++P  A+       AV+ +  G+   +L+ + + +     V V +GL  G  V T+
Sbjct: 281 QPGILLPPGALTSHQGKPAVWVIEEGKDTVSLHEISVARYRSQDVVVTAGLTPGAWVVTE 340