Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  125 bits (314), Expect = 2e-33
 Identities = 89/307 (28%), Positives = 147/307 (47%), Gaps = 4/307 (1%)

Query: 28  TVKTELISQIVELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSA 87
           TV   +  +++   G ++P  + +L  +  GRVV   VDV   VK+ +V+  + A     
Sbjct: 60  TVAPSVAGEVLSQTGEIRPTEETALGFRLDGRVVSRAVDVGAVVKQGEVIATLDARDSEN 119

Query: 88  ALDAAQAQLASATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAA 147
            L +A+A LA A A  R A+  L R +QL P GAI++ Q+D A++   SA +  +SAQA+
Sbjct: 120 QLQSAKADLARAAASERLAEQNLKRMKQLAPNGAIARSQLDEAQSNWSSAVSVRESAQAS 179

Query: 148 VEQAKESLGYTNITAPYDGIVTQRMVELGETVAPGTPLLRGFSLDELRVETEIPQRYQPY 207
           V   ++ LGYT ++AP  G++T      G+ V  G  ++R  +         + +R    
Sbjct: 180 VNSEQDRLGYTRLSAPIAGVITAVSANPGQVVNAGQEVVRLATFAGRDAVFNVSERLIAS 239

Query: 208 VADVSQFTVRTAQGEQLKPVEF--SLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEF 265
             +    TV       +K       +   AD Q+ T++ R+ L +    +V G  V+ E 
Sbjct: 240 GLNDPLVTVSLLSNPAIKTQGHVRDVSPLADAQTRTWRVRISLVEPPPEMVLGATVQGEV 299

Query: 266 NYGQREVLVVPSSAVLRRAELSAVYRVNNGQRA--LNPVRLGQVYGDYVEVLSGLELGDV 323
                 V+ +P+SA+ R+    AV+ V+   +   L P+ L       + V  GL  GD 
Sbjct: 300 TLPGGNVINLPASALTRQGGRPAVFVVDPQTQTLRLQPITLRHYSDSQMVVADGLAAGDK 359

Query: 324 VATQAVT 330
           VAT  V+
Sbjct: 360 VATAGVS 366