Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., Multidrug resistance protein MdtA from Acinetobacter radioresistens SK82

 Score =  121 bits (303), Expect = 3e-32
 Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 2/290 (0%)

Query: 42  GVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLASATA 101
           G VQ   Q +LA +  G+V     +V D V+  QVL  +         +AA+AQL SA A
Sbjct: 52  GEVQARQQTALAFRVGGQVTARLAEVGDRVRAGQVLARLDVSDAQLQSNAARAQLESAQA 111

Query: 102 QNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYTNIT 161
             + A  +L R+RQL P  A+S+ Q D+ E + +SA++A + AQ+  + +     Y  + 
Sbjct: 112 ALKIAADELQRFRQLLPMNAVSRSQYDAVENQYKSAESAYRQAQSNYQVSTNQTRYNQLQ 171

Query: 162 APYDGIVTQRMVELGETVAPGTPLLRGFSLDELRVETEIPQRYQPYV-ADVSQFTVRTAQ 220
           A   G++T+R +E+G+ VA G    +     +  V   IP++    +    + +    +Q
Sbjct: 172 ANRAGVITERNIEVGQVVAAGQVAYQLAIDGDRDVVIGIPEQTTSAIKVGQTAWVTLWSQ 231

Query: 221 GEQLKPVEFSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFNYGQREVLVVPSSAV 280
            +          S A  +S TFK ++ L +  +A+  G   +  F+Y Q  VL VP S+V
Sbjct: 232 PQARLAAYVREISPAADESRTFKVKVALREGPSAIQLGQSARVFFDYSQPNVLSVPLSSV 291

Query: 281 LRRAELSAVYRVNNGQRALN-PVRLGQVYGDYVEVLSGLELGDVVATQAV 329
               +   ++ +   QR    PV+LG    D V VLSGL+ GD V    V
Sbjct: 292 SAHEKQPYIWVLQQDQRIHKVPVQLGAYGRDSVPVLSGLKAGDWVVIGGV 341