Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  300 bits (768), Expect = 4e-85
 Identities = 272/1051 (25%), Positives = 488/1051 (46%), Gaps = 73/1051 (6%)

Query: 33   SAMTPLLALV-GLLMGLFAVMVTPK---EEEPQIDVTFADVYIPFPGASPREVESLVTTP 88
            S   P+ ALV  +L+ +F V+   K    E P I+     V   + GAS   +ES +T+ 
Sbjct: 7    SVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSV 66

Query: 89   AEQVISEIEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNKDWMPQGVGVG 148
             E  ++ I GID+I S S+   + I   F++G   N  V  I + +   +  +P+     
Sbjct: 67   LEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEAD-- 124

Query: 149  EPIIKPKGIEDVPIVTITLADKSDRFDQQQLTQ-VAHGLETELKRIPGTRDIYTIGGQNT 207
            +P +          V I L+  S   D+ QLT  +   L      I G   +   GG   
Sbjct: 125  DPQVFKNNGSGQASVYINLS--SSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYK 182

Query: 208  IVDVRLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRVEEVKQ 267
            ++ VR+ P  M G G+    ++ +L   N  SP  ++ +D+    V+  +     E+ + 
Sbjct: 183  VMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEY 242

Query: 268  LVVG-LHNGTPVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGENAVDVAK 326
            LVV    +GTP+YL+D+A V  G         T   DGI   V++ +  +   N ++VAK
Sbjct: 243  LVVKRASDGTPIYLKDVADVFIGAENENS---TFKSDGI-VNVSMGIVPQSDANPLEVAK 298

Query: 327  AVEARLVSLENQLIPQGIDVDITRDYGQTA-ADKSNTLMGKLAFATTAVVILVLLTM--G 383
             V   +  ++ Q +P+G  + I  DY  T   ++S + +    F T  +VILVL      
Sbjct: 299  RVHEEVDKVQ-QFLPKGTRLAI--DYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQ 355

Query: 384  WRESIVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHMA 443
             R +++  + + V+L+    A++ +GF++N ++L ALI SIG++VDDAIVVVENI  H+ 
Sbjct: 356  LRATLIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIE 415

Query: 444  MGKRKLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLIS 503
             G++ L         EVG   I  TL ++   LP++F+ G++G   +   +  +M ++ S
Sbjct: 416  RGEKPLLAAYK-GTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFS 474

Query: 504  LAVAFVLSPWLAGKFLKAGHHQEE-GKAANGIFHKIMSPFVTAPKQG-RNRLFLLLTILA 561
              +A  L+P L  K LKA        +  + +F ++ S +     +  R R    + I A
Sbjct: 475  SLIALTLTPVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAA 534

Query: 562  LIAGSVLLPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATLNDVPEVR 621
             I GS  L   Q V  ++ P +++    ++     G+      R+   M     D+ E R
Sbjct: 535  CIGGSYGL--MQLVPAQLTPSEDRG---VIFSFVRGADATSYNRMAANM-----DLVEQR 584

Query: 622  DYQIYAGTAAPINFNGLVRHYFMRNQAHQGDI--QVNLLGRKERDRDSHTIASQLRPQLN 679
                      P+   G ++ + +++ A  G+   Q   +     D +  T+ +Q    L+
Sbjct: 585  --------LMPLLGQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQ--EALS 634

Query: 680  EIAQRFGG--KVKVVEVPPGPPVWS--PILAEVYGPTQEIRNEAARKVREIFRETKDIVD 735
            ++ +   G   V+V    PG    S  P+   + G         A K+ E   ++  +  
Sbjct: 635  QVRKALAGIPDVRVFPFMPGFRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTG 694

Query: 736  VDMYLPERHEKWQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYPIPIQI 795
             D+   E+  +  V ID+ +AA L +   SI D L   +GGK +T       +Y +   +
Sbjct: 695  ADIDYSEKTPELVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDV--YL 752

Query: 796  QATETAKVRLEQVLNMKVGSPNGHAYPLSDLVEVRQTRMDDYIVHKNLVPMVMVVGDMSG 855
            +  E +      +  + + +  G    L  +  + +      + H N    V +  ++  
Sbjct: 753  RGDENSFNNAADLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEA 812

Query: 856  ELDSPLYGMFEIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIAYAV 915
                     + +G ALD     AQ  +      + ++V++ GE     E    + I +A+
Sbjct: 813  G--------YTLGQALDFLDQKAQEILP-----NDISVSYSGESKDFKENQSSVAIVFAL 859

Query: 916  GMVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIV 975
             +++ YL++ AQF+S++ PL++M  +P+ + G   G  ++G      S IGMI L G++ 
Sbjct: 860  ALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVT 919

Query: 976  RNSILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFIL-------DDP 1028
            +N IL+V+F NQ  ++G+ F +A+I ++A R +PI++TA   + G++ ++       +  
Sbjct: 920  KNGILIVEFANQLRDRGVEFEKAIIDASARRLRPILMTAFTTLAGSIPLIVSTGAGYESR 979

Query: 1029 IFNGLAISLIFGIFVSTVLTLLVIPVLYYVV 1059
            I  G  I   FG+  +T++TLLVIP +Y ++
Sbjct: 980  IAVGTVI--FFGMGFATLVTLLVIPAMYRLI 1008