Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1020 a.a., Cation/multidrug efflux pump from Enterobacter asburiae PDN3

 Score =  265 bits (678), Expect = 1e-74
 Identities = 265/1067 (24%), Positives = 462/1067 (43%), Gaps = 107/1067 (10%)

Query: 35   MTPLLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTPAEQVIS 94
            +T LL  +G   G+FA++   + E+P   +  A V   +PGAS ++VE  VT P E  + 
Sbjct: 16   LTILLLGIG---GIFALLNIGRLEDPAFTIKTAVVVTHYPGASAQQVEEEVTLPLENALQ 72

Query: 95   EIEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNK-----DWMPQGVGVGE 149
            ++  +D + S S    + I              V I ++ +SN+     D + + VG   
Sbjct: 73   QLPYLDNVSSISSNGLSQIT-------------VNIASRYHSNELPQIWDELRRRVGDAS 119

Query: 150  PIIKPKGIEDVPIVTITLAD--------KSDRFDQQQLTQVAHGLETELKRIPGTRDIYT 201
             +  P  +   P V     D          D F   +L + A  L  EL  IPG   +  
Sbjct: 120  RLFPPGVV--TPFVNDDFGDVFGFFFAISGDEFSNPELVRYAEQLRRELILIPGVAKVAI 177

Query: 202  IGGQNTIVDVRLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQ-VGQFLT 260
             G  +  V++ +   KM   GITL+QL+  L   N  S    +T   +   +   G+F  
Sbjct: 178  GGAISQQVNIDISLTKMAARGITLNQLSALLSRLNVVSSAGEITSGTESIRLHPTGEFEN 237

Query: 261  RVEEVKQLVVGLHNGTPVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGEN 320
              E    ++     G    L DIAT+S G+N +  +++  +      AVT+ V+   G N
Sbjct: 238  LDELADIIITPSGTGAATRLRDIATLSRGLNESPASIYHANGK---KAVTMGVSFIPGVN 294

Query: 321  AVDVAKAVEARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLL 380
             +DV  A+EA+L  +  +  P GI +D+  D         N  +     A   V+ ++L+
Sbjct: 295  VIDVGHALEAKLNQMSAEK-PAGIQIDLFYDQAAEVGHSVNGFIINFLMALAIVIGVLLV 353

Query: 381  TMGWRESIVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHR 440
             MG R  I++  ++ + ++ TL   + WG  L R+SL ALI ++ +LVD+AIV+VE +  
Sbjct: 354  FMGVRSGIIIAFSLALNVLGTLLIMYLWGIELQRISLGALIIALSMLVDNAIVIVEGVLI 413

Query: 441  HMAMGKRKLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGM 500
                G   L+  +   +     P + AT+  I A  P+       G Y   +     + +
Sbjct: 414  ARQQGSPLLTA-VNYIIRRSALPLLGATVIAILAFAPIGLSQDSTGEYCKSLFQVLLISL 472

Query: 501  LISLAVAFVLSPWLAGKFL--------KAGHHQEEGKAANGIFHKIMSPFVTAPKQGRNR 552
            ++S   A  L+P L   +L        K        K     + ++++  +       ++
Sbjct: 473  MLSWFSALTLTPVLIKWWLFKNDSAPDKTDESDPYDKRLYRAYQRLLNTLL------HHK 526

Query: 553  LFLLLTILALIAGSVLLPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGA 612
               L+ + AL+A SV    F AV     P  N   F + L +P G+ ++ T+++  ++  
Sbjct: 527  APALIVMAALLAASVW--GFGAVRQNFFPSSNTPIFFVDLWLPYGTDIKWTEKMTGDIEK 584

Query: 613  TLNDVPEVRDYQIYAGTAAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIAS 672
            T+N  P V   +    T    +   ++ +   R  ++   I V +  ++     +  +  
Sbjct: 585  TINGQPGV---ETTVSTIGQGSMRFILTYSGQRQYSNYAQIMVRMDDQRNISALTRHVDE 641

Query: 673  QLR---PQLNEIAQRFGGKVKVVEVPPGPPVWSPILAEVYGPTQEIRNEAARKVREIFRE 729
             +    PQ+N   +R         V  GP   S I   + GP  +       ++R I  +
Sbjct: 642  YIARNYPQVNASTKR---------VMFGPSGDSAIEVRIKGPDPD-------RLRLIASQ 685

Query: 730  TKDIVDVDMYLPERHEKWQVVIDRSKAAHLQ----------VPYASIVDALATAVGGKPI 779
              DI+  D         WQ   +RSK    Q          V    + +AL     G   
Sbjct: 686  VDDILTRDPATGSVRNDWQ---NRSKVIRPQYVAALGRELGVDKQDVDNALEMNFSGSRA 742

Query: 780  TYLHSEHSKYPIPIQIQATETAKVRLEQVLNMKVGSPNGHAY-PLSDLVEVRQTRMDDYI 838
              L+ E S   +P+ ++  E+ ++    + N+ V S     Y PLS++V       +D +
Sbjct: 743  G-LYREGSDL-LPVVVRPPESERLDANHLNNVLVWSQTRQQYIPLSNVVSRFSLEWEDPL 800

Query: 839  VHKNLVPMVMVVGDMSGELDSPLYGMFEIGFALDEQMGLAQYYIHQPDGLS---GVAVAW 895
            + +     V+ V      L     G             +      Q D LS   G ++ W
Sbjct: 801  ILRRDRSRVLTVQTDPDPLSQQTSG------------DILARVKPQIDALSLPHGYSIEW 848

Query: 896  DGEWTVTYETFRDMGIAYAVGMVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALL 955
             G+   + E  + +     +G ++++++ V  F S    + I   +PL +IGV PG  L 
Sbjct: 849  GGDAENSSEAQQGLFTTLPLGYLVMFVITVLMFSSVKNAVAIWLTVPLALIGVTPGFLLT 908

Query: 956  GAQFTATSMIGMIALAGIIVRNSILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTAL 1015
            G  F   ++IG+++L+G+++RN I+LV+ I QQ  Q     EA++ +A  R +PI+LTA 
Sbjct: 909  GIPFGFMALIGLLSLSGMLIRNGIVLVEEIEQQKTQ-KDQHEAIVYAATSRLRPILLTAF 967

Query: 1016 AAMIGAVFILDDPIFNGLAISLIFGIFVSTVLTLLVIPVLYYVVMRK 1062
              ++G   +L D  F  +A+ ++FG+  +T+LTLLV+PV+Y    RK
Sbjct: 968  TTVLGLAPLLLDVFFQSMAVVIMFGLGFATILTLLVLPVIYACFHRK 1014