Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1025 a.a., Cation/multidrug efflux pump from Enterobacter asburiae PDN3

 Score =  283 bits (723), Expect = 6e-80
 Identities = 252/1043 (24%), Positives = 459/1043 (44%), Gaps = 59/1043 (5%)

Query: 36   TPLLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTPAEQVISE 95
            T L++L   L G+    + P    PQ+D     V    PGASP  + S V TP E+ +  
Sbjct: 14   TILISLAITLCGVLGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGR 73

Query: 96   IEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNKDWMPQGVGVGEPIIKPK 155
            I G++++ S S      I+  F      N A   +   + + +  +P G+    P  +  
Sbjct: 74   IAGVNEMTSSSSLGSTRIILEFSFDRDINGAARDVQAAINAAQSLLPSGMP-SRPTYRKA 132

Query: 156  GIEDVPIVTITLADKSDRFDQQQLTQVAHG-LETELKRIPGTRDIYTIGGQNTIVDVRLD 214
               D PI+ +TL   SD + Q QL   A   L   + +I G  D+   G     V V L+
Sbjct: 133  NPSDAPIMILTLT--SDTYSQGQLYDFASTQLAQTISQINGVGDVSVGGSSLPAVRVGLN 190

Query: 215  PAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRVEEVKQLVVGLHN 274
            P  +   G++LD +  ++  AN   P   +   +  + +     L    E + L++  +N
Sbjct: 191  PQALFNQGVSLDDVRSAISTANVRKPQGAIEDGSHRWQIHTNDELKTAAEYQPLIIHYNN 250

Query: 275  GTPVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGENAVDVAKAVEARLVS 334
            G  V L D+A+V+  V    Q+V         PA+ + + K    N ++   ++ ARL  
Sbjct: 251  GAAVRLSDVASVTDSV----QDVRNAGMTNAKPAILLMIRKLPEANIIETVNSIRARLPD 306

Query: 335  LENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLLTM-GWRESIVVGMA 393
            L+ + IP  ID+ I +D   T       +   L  +   V+++V L +   R +++  +A
Sbjct: 307  LQ-ETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATLIPAVA 365

Query: 394  IIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHMAMGKRKLSELI 453
            + V+L+ T  A +  GF+LN +SL AL  + G +VDDAIVV+ENI RH+  G + L   +
Sbjct: 366  VPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHLEAGVKPLQAAL 425

Query: 454  PPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLISLAVAFVLSPW 513
                 EVG   +  +L+++A  LP+  + GL G  +    +  S+ + ISL ++  L+P 
Sbjct: 426  -QGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLVISLTLTPM 484

Query: 514  LAGKFLKAG--HHQEEGKAANGIFHKIMSPFVTAPKQGRNRLFLLLTILALIAGSVLLPV 571
            + G  LK    H Q   K    +   +   +  + K   N   L+  +L    G+++L V
Sbjct: 485  MCGWMLKRSKPHSQPRRKGFGRLLMAMQEGYGKSLKWVLNHTRLVGLVL---IGTIVLNV 541

Query: 572  FQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFE-MGATLNDVPEVRDYQIYAGTA 630
            +  + +    F  +    ++        ++  Q + F+ M   L D       +I     
Sbjct: 542  WMYITIPKTFFPEQDTGVLM------GGIQADQSISFQAMRGKLQDF-----MKIIREDK 590

Query: 631  APINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQLRPQLNEIAQRFGGKVK 690
            A  N  G    +   ++ + G + + L  R ER+  +  +  +LR +L   A+  G  + 
Sbjct: 591  AVDNVTG----FTGGSRVNSGMMFITLKPRGERNETAQQVIDRLRVKL---AKEPGANLF 643

Query: 691  VVEVPP----GPPVWSPILAEVYGPTQEIRNEAARKVREIFRETKDIVDVDMYLPERHEK 746
            ++ V      G    +     +         E   K+R+      ++ DV+    +   +
Sbjct: 644  LMAVQDIRVGGRQANASYQYTLLSDDLAALREWEPKIRKALAALPELADVNSDQQDNGAE 703

Query: 747  WQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYPIPIQIQATETAKVRLE 806
              +  DR   + L +   +    L  A G + I+ ++   ++Y + +++    T  +   
Sbjct: 704  MALTYDRETMSRLGINVEAANSLLNNAFGQREISTIYQPMNQYKVVMEVDPRYTQDI--S 761

Query: 807  QVLNMKVGSPNGHAYPLSDLVEVRQTRMDDYIVHKNLVPMVMVVGDMSGELDSPLYGMFE 866
             +  M V + +G A PLS     +       + H+ L               S +     
Sbjct: 762  ALDKMFVINNDGKAIPLSYFASWQPANAPLSVNHQGL------------SAASTISFNLP 809

Query: 867  IGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIAYAVGMVLIYLLVVA 926
             G +L E        + Q    S V  ++ G   V  ET     I     +  +Y+++  
Sbjct: 810  AGSSLSEASDAINRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILILAAIATVYIVLGV 869

Query: 927  QFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIVRNSILLVDF-I 985
             ++SY+ PL I++ +P   +G +    L GA F+  ++IG++ L GI+ +N+I++VDF +
Sbjct: 870  LYESYVHPLTILSTLPSAGVGALLALELFGAPFSLIALIGIMLLIGIVKKNAIMMVDFAL 929

Query: 986  NQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFIL-----DDPIFNGLAISLIFG 1040
            + Q    ++  EA+ Q+  +R +PIM+T LAA+ GA+ ++        +   L I+++ G
Sbjct: 930  DAQRNGNLSPEEAIFQACLLRFRPIMMTTLAALFGALPLVISGGDGSELRQPLGITIVGG 989

Query: 1041 IFVSTVLTLLVIPVLYYVVMRKR 1063
            + +S +LTL   PV+Y    R R
Sbjct: 990  LVMSQLLTLYTTPVVYLFFDRLR 1012