Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1051 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  347 bits (890), Expect = 3e-99
 Identities = 269/1054 (25%), Positives = 498/1054 (47%), Gaps = 61/1054 (5%)

Query: 29   AFQNSAMTPLLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTP 88
            + + S +  +L  +  L+G+F+      E  P+       V   +PGA+P EVE+ VT  
Sbjct: 7    SIKRSTIVVVLFTILTLLGIFSYTQMSYELLPKFSPNVVTVSTVYPGAAPSEVENSVTRK 66

Query: 89   AEQVISEIEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNKDWMPQGVGVG 148
             E  ++ +EGID + S S    ++I       V  +  +      + +    +P+ V   
Sbjct: 67   LEDALASLEGIDVMKSTSLESFSIITIELDDDVDVDLILQDAQRDIDAVLGDLPEDVD-- 124

Query: 149  EPIIKPKGIEDVPIV------TITLADKSDRFDQQQLTQVAHGLETELKRIPGTRDIYTI 202
             P +    ++D+PI+       +T  D  D  DQ+        ++  + +I G   +  +
Sbjct: 125  PPSLGKFSLDDMPIMQMGAYSNLTATDFYDLMDQR--------IQPMISQIDGVAQVNLL 176

Query: 203  GGQNTIVDVRLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRV 262
            GG    + V LD  K+N +GI+  Q+NQ++  AN   P  +L  D ++  +++    T+V
Sbjct: 177  GGAEREIKVNLDQNKLNTYGISPLQVNQAIAQANLDFPTGKLKSDKEQILIRLAGKFTQV 236

Query: 263  EEVKQLVVGLHNGTPVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGENAV 322
            +E+ +L+V   +G+P+ ++D+A V   V++          +G + A+ I++ K+   NAV
Sbjct: 237  DEIGELIVSYADGSPIKIKDVAEV---VDSNKDEEILSRLNG-NSAIGISIQKQSDANAV 292

Query: 323  DVAKAVEARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLLTM 382
            DVA+ V   L  LE       +  +I++D  +   + +N ++  L  A   V +++LL +
Sbjct: 293  DVAERVNKALAQLETTYAGDDLRFEISQDSSEFTLEAANAVIHDLIIAVVLVAVIMLLFL 352

Query: 383  -GWRESIVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRH 441
              +R +++V +A+ ++++ T    +  GFTLN +SL AL   +GILVDDAIVV+ENI+RH
Sbjct: 353  HSFRNAVIVMIAVPMSIIATFTVMYLAGFTLNLMSLLALSLVVGILVDDAIVVIENIYRH 412

Query: 442  MAMGKRKLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGML 501
            M  GK  +       + E+GG     TL ++   +P++   GL+   ++   I  ++  +
Sbjct: 413  MEKGKSAIQASYD-GIREIGGTVTSITLVIVVVFVPLSMTGGLISGILTQFSITVAVATM 471

Query: 502  ISLAVAFVLSPWLAGKFLKAGHHQEE---GKAANGIFHKIMSPFVT-----APKQGRNRL 553
            +SL VAF L P L  +F K  H   +   GK  NG F   +  FV            +++
Sbjct: 472  MSLLVAFTLIPLLTSRFSKLEHLDPKSIFGKIVNG-FEGFLDAFVAWLTGILKWSFNHKI 530

Query: 554  FLLLTILALIAGSVLLPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGAT 613
              L+    L   S +L  +  +  + +   +K EF + L++P+ ++LE+T     E    
Sbjct: 531  ITLVATFVLFVSSFMLVGYGFIGSEFVSQGDKGEFIMRLELPKSATLEETNFTTREAENF 590

Query: 614  LNDVPEVRDYQIYAGTAAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQ 673
            L   P V       G     + +G       ++  +  +I V ++  K+R+  +   A +
Sbjct: 591  LTKNPMVTSVFTTVGQTTG-SMSG------SQSTPYASEITVKMVDGKKRNLTAPEFARE 643

Query: 674  LRPQLNEIAQRFGGKVKVVEVP-PGPPVWSPILAEVYGPTQEIRNEAARKVREIFRETKD 732
            +   L E     G +   V +   G    +PI   + GP  +     +++V     +   
Sbjct: 644  MEIALEE--NIVGAEFTAVPIGITGTANDAPIQIVLSGPDLDTLKSFSQRVLAEVEKVPG 701

Query: 733  IVDVDMYLPERHEKWQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYPIP 792
                   L + + + +V +DR+K + L +  A +   +  A  G   T       +Y I 
Sbjct: 702  TRKAQTSLEDGNPEIRVEVDRAKMSDLGLDMAMVGGTMQVAFNGNTDTKYRDGDYEYDIN 761

Query: 793  IQIQATETAKVRLEQVLNMKVGSPNGHAYPLSDLVEVRQTRMDDYIVHKNLVPMVMVVGD 852
            I++   +   V    + N+   +  G    L    +   +     +  ++ +  V V   
Sbjct: 762  IRMDEFDRKSVA--DIENLAFVNTKGQTVLLKQFAKAIPSEGPSELNRQDRITSVTVQSQ 819

Query: 853  MSGELDSPLYGMFEIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIA 912
            +SG           +G  + E+       I + D    V VA++G+  +  E F  +G+A
Sbjct: 820  VSGRPSGT------VGTEIQER-------IAKLDLPKEVTVAYEGDMKMQEEGFGSLGVA 866

Query: 913  YAVGMVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAG 972
                ++LIYL++VA + +Y+ PL++M  +PL +IG +   A+ G+  +  S++G+I L G
Sbjct: 867  LLASILLIYLIMVALYDNYVFPLVVMFSLPLAVIGALLALAMSGSALSIFSILGLIMLMG 926

Query: 973  IIVRNSILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFI-----LDD 1027
            ++ +N+ILLVDF NQ    G+    A++++  +R +PI++T LA + G + I        
Sbjct: 927  LVAKNAILLVDFTNQLKAAGLEVKAALVKAVEIRFRPILMTTLAMVFGMLPIALASGAGA 986

Query: 1028 PIFNGLAISLIFGIFVSTVLTLLVIPVLYYVVMR 1061
               NGLA +LI G+  S  LT++V+PV+YY+  R
Sbjct: 987  EWKNGLAWALIGGLISSMFLTMVVVPVIYYIFDR 1020