Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1048 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

 Score =  348 bits (893), Expect = 1e-99
 Identities = 289/1048 (27%), Positives = 493/1048 (47%), Gaps = 70/1048 (6%)

Query: 44   LLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTPAEQVISEIEGIDKIY 103
            L+MG F++     ++ P +DV    V   +PGA+P  VE  VT P E  ++ I G+D++ 
Sbjct: 22   LVMGAFSLQRLGLDQYPNVDVPVVVVVTSYPGATPETVEMEVTRPVEDALNAIGGLDEVT 81

Query: 104  SFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNKDWMPQGVGVGEPIIKPKGIEDVPIV 163
            S S    +++VA FK+ V  + A   + +K+ + +   P+     +P+I        PI+
Sbjct: 82   STSYEGRSVVVAKFKLEVQSSAAAQEVRDKIAAIEANFPEDTK--KPVISRFDPAAEPIL 139

Query: 164  TITLADKSDRFDQQQLTQVAHG-LETELKRIPGTRDIYTIGGQNTIVDVRLDPAKMNGFG 222
            ++ ++  S   D   L  +A   +  +L  + G      +GG+   +DV +D  +M   G
Sbjct: 140  SLAISSTS--LDVPALATLAEQKVVRQLTTVAGIGQATLVGGRKRQIDVTIDETRMRALG 197

Query: 223  ITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRVEEVKQLVVGLHNGTPVYLED 282
            I ++++  +L A N +SP   +     E  +Q+   +   E +  +VV    G  + L D
Sbjct: 198  IGVNEVVTALRAGNSNSPAGSVVDPVSERTIQIQSRIEEPEALLDMVVARRGGVAILLRD 257

Query: 283  IATVSFGVNTATQN-VWTGDRDGIHPAVTIAVAKKGGENAVDVAKAVEARLVSLENQLIP 341
            +AT+S G   A    ++ G       A+ I + K    N V V   V  RL +L  +L P
Sbjct: 258  VATLSEGAADAENRAIYNGQT-----ALAIDIVKVQDANTVQVVSDVRKRLDALNAELSP 312

Query: 342  QGIDVDITRDYG---QTAADKSNTLMGKLAFATTAVVILVLLTMGWRESIVVGMAIIVTL 398
            Q I + I  D     Q +  +  T +  +  A  AV I+ L    WR +++ G+ + + +
Sbjct: 313  QNIQLRIVTDSSIPIQESVTQVQTTL--IEGAALAVAIVFLFLNSWRSTVITGLTLPIAI 370

Query: 399  MITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHMAMGKRKLSELIPPAVD 458
            + TL      GFTLN +SL AL  SIGILVDDAIVV ENI RH+ MGK  L   +     
Sbjct: 371  IGTLTVVDFLGFTLNTLSLLALTLSIGILVDDAIVVRENITRHLHMGKSHLRAAL-DGTG 429

Query: 459  EVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLISLAVAFVLSPWLAGKF 518
            E+G   I  T T++A  LP+AF+ G++G +     +  S  +LISL VAF L P L+  +
Sbjct: 430  EIGLAVIATTATIVAVFLPVAFMDGIVGRFFYQFGVTVSAAVLISLFVAFTLDPMLSSVW 489

Query: 519  LKAGHHQEEGKAANGIFHKIMSPF------------VTAPKQGRNRLFLLLTILALIAGS 566
                    +  A  G   ++++ F                   R+RL  LL    +  GS
Sbjct: 490  YDP---DAQADAKRGPIGRLIARFDHGFEWMAGQYRHAIDWTLRHRLVTLLVTAGIFIGS 546

Query: 567  VLLPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATLNDVPEVRDYQIY 626
            + +     V  + +P  ++  FQI L  P GSSL+ T   L ++   L + PEV    +Y
Sbjct: 547  LFM--VPLVGTEFVPDADEGRFQINLTAPVGSSLDYTTAKLQQVKKALREFPEVE--MLY 602

Query: 627  AGTAAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQLRPQLNEIAQRFG 686
                + IN  G           H+  I V L+    R++   ++A  +R +L+ I    G
Sbjct: 603  ----STINTGGAA-------GKHRAAILVGLVPLSAREQTPLSLAEPVRKRLSAIP---G 648

Query: 687  GKVKVVEVPPGPPVWSPILAEVYGPTQEIRNEAARKVREIFRETKDIVDVDMYLPERHEK 746
             ++ +++   G    SP+   + G  + +  + A  + E  ++   +V+V     +    
Sbjct: 649  IEINILQNGLGGGE-SPVQLSILGDDRAVLEKIANGLVEDMKKIPGLVEVTSSTKDVTSI 707

Query: 747  WQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEH-SKYPIPIQIQATETAKVRL 805
              V +  + A+ L +  A +  AL+  +GG+ ++     H + Y I +++     +    
Sbjct: 708  LSVRLKPAAASDLGIARADLAAALSALIGGEDVSKWTDAHGNSYDIVVRLPVERRSDAAR 767

Query: 806  EQVLNMKVGSPNGHAYPLSDLVEVRQTRMDDYIVHKNLVPMVMVVGDMSGELDSPLYGMF 865
               L +  G    +  PL     VR  ++ D  +     P  +   D   E+   L    
Sbjct: 768  LGELMITTGRTGANGAPLM----VRLDQVAD--IGTVAAPAEIRRFDNRREI---LVSAN 818

Query: 866  EIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIAYAVGMVLIYLLVV 925
              G  L +     Q      D  +G  + + GE     ET   MG A ++ ++ IY+++ 
Sbjct: 819  ITGRTLGDVTETLQGLTASRDLPAGYRIRFGGEAETMQETVGHMGTALSMAIIFIYIVLA 878

Query: 926  AQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIVRNSILLVDFI 985
            +QF S+L PL IM  +PL++IGV+ G  + G+     S+IG I L G++ +N ILLVDF 
Sbjct: 879  SQFGSFLQPLAIMVSLPLSLIGVLLGLMVAGSTINMFSLIGFIMLMGLVTKNGILLVDFA 938

Query: 986  NQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFILDDPIFNG------LAISLIF 1039
            N++  +G+  +EA+  +  +R +PI++T LA + G +  L   +  G      +A +++ 
Sbjct: 939  NRERRRGLTLNEALANAGVIRFRPIIMTTLAMIFGMI-PLGLAVGGGGAQRAPMAHAVVG 997

Query: 1040 GIFVSTVLTLLVIPVL--YYVVMRKRFA 1065
            G+  ST+LTL+V+PV+  Y   + +RFA
Sbjct: 998  GLISSTLLTLIVVPVILSYIDSITRRFA 1025