Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1034 a.a., Multidrug resistance protein MdtC from Acinetobacter radioresistens SK82

 Score =  334 bits (857), Expect = 2e-95
 Identities = 271/1057 (25%), Positives = 487/1057 (46%), Gaps = 91/1057 (8%)

Query: 36   TPLLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTPAEQVISE 95
            T ++ L  +++GL +      EE P +D  F  VY  +PGASP  VES +T   E  I+ 
Sbjct: 14   TIMMMLCLMVLGLASWQRMGVEEYPDVDFPFVVVYTSYPGASPETVESEITKKMEDQINT 73

Query: 96   IEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNKDWMPQGVGVGEPIIKPK 155
            I G+ K+ S S    + IVA F + +  + A   + +K+ S        +   +P+++  
Sbjct: 74   ISGLKKLTSTSSEGLSTIVAEFDLDISSSVAAQDVRDKIASVTAQFRDEIE--DPVVERY 131

Query: 156  GIEDVPIVTI-------TLADKSDRFDQQQLTQVAHGLETELKRIPGTRDIYTIGGQNTI 208
                  I+++       +L D S   DQ+ L Q        L+ + G  ++  +G     
Sbjct: 132  DPTSSAIMSLVFESNNMSLKDLSSYLDQRILPQ--------LRTVEGVGNVNLLGDAQRQ 183

Query: 209  VDVRLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRVEEVKQL 268
            + + +DP K+  FG+ +DQ+  +L   N   P   L   + E  V++   +    +  +L
Sbjct: 184  IRIAVDPKKLRSFGVGIDQVINTLKNENVQIPGGALQQPDSELVVEIQAKVLNPYQFGEL 243

Query: 269  VVGLHNGTPVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGENAVDVAKAV 328
            ++    GTPVYL+ +AT++          +   +     AV I + +    N VDV K  
Sbjct: 244  IIANKQGTPVYLKQVATITDSQAEMETAAYLNGKS----AVAIDILRSADANIVDVVKNA 299

Query: 329  EARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLLTMG-WRES 387
               +  +E QL P G  + +  D  ++       +   +       +I+VLL +G +R +
Sbjct: 300  YQVIDRIEQQL-PAGTTLKVVVDNSESIQSTIKDVARTIVEGAVLAIIIVLLFLGSFRST 358

Query: 388  IVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHMAMGKR 447
            ++ G+ + + L+ TL   WA+GFT+N ++L AL  SIG+L+DDAIVV ENI RH  MGK 
Sbjct: 359  VITGLTLPIALLGTLTFIWAFGFTINMMTLLALSLSIGLLIDDAIVVRENIVRHSDMGKD 418

Query: 448  KLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLISLAVA 507
             ++  +     E+G   +  TLT++A  LP+AF+ G++G +     +  S  +LIS+ V+
Sbjct: 419  HVTAALD-GTKEIGLAVLATTLTIVAVFLPVAFMGGIIGRFFYQFGVTVSTAVLISMFVS 477

Query: 508  FVLSPWLAGKFLKAGHHQEEGKAANGIFHKIMSPF--VTAPKQGRNRLFLLLTILALIAG 565
            F L P L+  + +     ++       F         +TA  +   RL L   +L ++  
Sbjct: 478  FTLDPMLSAHWAERKDRPKKQNTLTRFFAWTSKKLDDLTAVYEKLLRLALRFRLLTVLIA 537

Query: 566  SVLLPVFQAVVLKML------PFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATLNDVPE 619
              +L +F A  L  L      P  +K   ++  + P  +SL+ TQ  L ++   +   PE
Sbjct: 538  --VLSLFGAFALSKLIGTEFVPTPDKGSIRVKFETPVDASLQYTQAKLQQVENIIRQHPE 595

Query: 620  VRDYQIYAGTAAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQLRPQLN 679
            V+               G++     R + H G I+V +  R ER++  + + + LR +L 
Sbjct: 596  VQTTY------------GVINGMTDRGKNH-GSIRVTVTPRHEREQTLNDLNNDLRNRLQ 642

Query: 680  EIAQRFGGKVKVVEVPPGPPVWS----PILAEVYGPTQEIRNEAARKVREIFRETKDIVD 735
            ++     G + +  V     V S    PI   + GP  +     + +     ++   +VD
Sbjct: 643  QV-----GGITITSVASADEVVSGGRKPIQISIKGPDLDELQRISDRFMAEMKKINGVVD 697

Query: 736  VDMYLPERHEKWQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYPIPIQI 795
            ++  L E      V I+R  A+ L +    I + +   + G  +T    E  +    + +
Sbjct: 698  LETSLKEPKPTLSVSINRVLASDLGLSVNQIANVVRPLIAGDNVTTWEDERGEN-YDVNL 756

Query: 796  QATETAKVRLEQVLNMKVGSPN------GHAYPLSDLVEVRQTRMDDYIVHKNLVPMVMV 849
            + +E A+     + NM + S            PL+ +   ++T     I  + L   V++
Sbjct: 757  RLSENARTLPSDIQNMYITSEKLDNNNQNILVPLATVASFKETSGASQINRRELSREVLI 816

Query: 850  VGDMSGELDSPLYGMFEIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDM 909
              + SG     + G  +   A+  Q  L   Y    +G +   +A    + +T       
Sbjct: 817  EANTSGRPAGDIGGDID---AMQAQFKLPPGYSFDTEG-ANADMAESLGYAIT------- 865

Query: 910  GIAYAVGMVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIA 969
              A  + +V IY+++ +QF S++ P  IMA +PL++IGV     L  +     S+IG+I 
Sbjct: 866  --AITLSIVFIYIVLGSQFNSFIHPAAIMASLPLSLIGVFLALYLFNSTMNLFSIIGIIM 923

Query: 970  LAGIIVRNSILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFILDDPI 1029
            L G++ +N+ILL+DFI + +E GM   +A++ +   R +PI++T  A ++G V     P+
Sbjct: 924  LMGLVTKNAILLIDFIKKGIESGMDRYDAIVAAGTTRLRPILMTTSAMVMGMV-----PL 978

Query: 1030 FNGL----------AISLIFGIFVSTVLTLLVIPVLY 1056
              GL          A ++I G+  ST+LTL+V+P+++
Sbjct: 979  ALGLGESGEQSSPMAHAVIGGVITSTLLTLVVVPIIF 1015