Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  241 bits (615), Expect = 2e-68
 Identities = 132/304 (43%), Positives = 182/304 (59%), Gaps = 5/304 (1%)

Query: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60
           M   +DL LFV  A  GS S AA  + L+ A  SAA++R+E+Q+   L  RSTR +RLT 
Sbjct: 1   MLRFDDLQLFVRAADLGSLSAAARVMDLSPAVASAALKRIEQQLNTRLLARSTRSLRLTA 60

Query: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120
           EGE FL   + AL++L EG   +A  +  ++G L +SAPSD GRN LL W+DEF   +P 
Sbjct: 61  EGEGFLEYARAALSSLDEGRRLLASGQDHVSGVLQLSAPSDFGRNQLLPWLDEFQRDYPQ 120

Query: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPIL 180
           +TV+L L DR+ D++  PVDIA+RYG+P DS+L+A+ +   N RVLCASP YLA +    
Sbjct: 121 LTVRLLLGDRIADLFRQPVDIALRYGEPEDSSLIALPVAPDNVRVLCASPGYLARYGEPR 180

Query: 181 HPDDLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIAN 240
           H   L  HNCL +ML   +H+ W         S+ V G+   +D +VV R AV G GIA 
Sbjct: 181 HLGQLAQHNCLLYMLGSRVHDHWTFHDGKREVSLTVTGDRFSDDADVVRRWAVAGVGIAY 240

Query: 241 KSLMDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIREKGCQQRRA 300
           KS +D+S D++ GRL  ILPE      P+ ++CA R  ++  +   +E +       R A
Sbjct: 241 KSWLDVSTDVLAGRLRLILPELRGERTPLNLLCAHRAQLSKPVNLLREML-----VSRCA 295

Query: 301 VLTA 304
            LTA
Sbjct: 296 TLTA 299