Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  166 bits (419), Expect = 8e-46
 Identities = 94/292 (32%), Positives = 151/292 (51%), Gaps = 2/292 (0%)

Query: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60
           M  LN + +FV    +GSFS  A  +  T   +S  +R LE ++   L  RSTR + LT 
Sbjct: 1   MDKLNAMAIFVRVIERGSFSAVAREMQTTQPTISKILRALETELGGKLIARSTRQLSLTD 60

Query: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120
           EG+ + +  +  LA +          +  +AG L I +    GR  +   + +F+  +P+
Sbjct: 61  EGQRYYSHCREILAAVDAAEHSFQTGKEAIAGPLRIGSSVSFGRLHIAARLSDFLQQYPD 120

Query: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPIL 180
           V V L L+D L DM +  +D+ +R G+  DS L+A  +  +  RV  ASP+YLA HP   
Sbjct: 121 VQVDLQLNDHLQDMVSEGLDVTLRIGELRDSGLIARQI-GTTHRVTLASPDYLARHPAPQ 179

Query: 181 HPDDLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIAN 240
            P +L  HNCL F L  +  N+W+  + G   SV + GN   N+ E V  + + G GIA 
Sbjct: 180 TPHELSQHNCLLFNLLSS-QNQWVYEKEGTRQSVRITGNAQSNNSEAVREMVLTGLGIAL 238

Query: 241 KSLMDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIRE 292
             L     D+  GR+V +L ++ +  +PI+ V A  R  +  ++AF +++ +
Sbjct: 239 SPLWLFYDDLKAGRVVALLQDYTAQSLPIHAVSAPNRRQSARVKAFVDYMAD 290