Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  236 bits (602), Expect = 5e-67
 Identities = 124/290 (42%), Positives = 174/290 (60%), Gaps = 1/290 (0%)

Query: 4   LNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTHEGE 63
           ++DL + V TAR G+ + AA++L +T AA SA ++RLE Q+   LF RSTR +RLT +G+
Sbjct: 6   ISDLQVLVHTARGGTLTAAAHALGITPAAASATLKRLEAQLGARLFERSTRAMRLTPQGQ 65

Query: 64  IFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPNVTV 123
             L     A   L EG   +   RG+L G L +++PSDL R+ LL W DEF+ALHP V +
Sbjct: 66  TLLDYAVRAFELLDEGESLVTADRGELVGTLRVASPSDLTRSTLLPWFDEFLALHPGVQL 125

Query: 124 KLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPILHPD 183
            L + DR  D+  + VD+A+RYG  ADS LVA     +N  +L ASP YL  HP    P 
Sbjct: 126 SLSVGDRPLDVMRDEVDVALRYGALADSRLVARAFALTNP-LLTASPAYLLRHPAPKVPQ 184

Query: 184 DLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIANKSL 243
           DL HHNCL F  +   H  W   +NG+   V V GN + +D  +     V G GI+ KS 
Sbjct: 185 DLAHHNCLIFNRSGRRHRVWRFGQNGQWTEVRVNGNRSVDDASLAREWTVAGHGISLKSA 244

Query: 244 MDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIREK 293
           +D+ +DI +GRLVR+LP+WE+ P P++ +    R +   +RAF +F+  K
Sbjct: 245 LDVREDIREGRLVRLLPDWETEPYPLHALLPSGRFVPARVRAFVDFLALK 294