Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  151 bits (381), Expect = 2e-41
 Identities = 95/298 (31%), Positives = 150/298 (50%), Gaps = 6/298 (2%)

Query: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60
           M  L  L  FV  A +G  + AA +  +  A +   +  LEE++   L VR+TR I LTH
Sbjct: 1   MDRLKQLESFVSVATRGGLTAAAKAEGVAPAIMGRRLDALEERLGVKLLVRTTRRITLTH 60

Query: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120
           EG  FL   Q  L         ++    + +G L ++AP+  GR  +   +  F ALHP 
Sbjct: 61  EGSAFLEDCQRLLTEFANAEASVSAGGVKASGHLRVTAPAGFGRRHVAPLVPRFHALHPE 120

Query: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPIL 180
           VT+ L+LSDR+ D+     D A+R G   DS+LV++ L D N R   A+P+++  H    
Sbjct: 121 VTISLNLSDRVVDVTGESFDCAVRVGDLPDSSLVSVRLAD-NRRRCVATPDFVRRHGKPK 179

Query: 181 HPDDLQHHNCLCFMLADTLHNKW---ILSRNGETHSVVVQ--GNPACNDGEVVHRLAVKG 235
           HP +L    CL      +    W   I +  G    + ++  G   C+DG+V+H   + G
Sbjct: 180 HPGELSRFACLTLSSDASQTRGWAFRITTEAGVQELIHLRPSGPLDCSDGQVLHDWCLAG 239

Query: 236 KGIANKSLMDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIREK 293
            GIA +S  ++  +I  G LV +L E+ + P  IY V A  + +   +R + +F++E+
Sbjct: 240 HGIAWRSTWEVEAEIDAGLLVPLLDEFAAPPNGIYAVFAGAKHLPLRVRLWLDFLKEQ 297