Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  164 bits (414), Expect = 3e-45
 Identities = 96/291 (32%), Positives = 165/291 (56%), Gaps = 3/291 (1%)

Query: 4   LNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTHEGE 63
           + +L++F+    + SFS AA SL    + VS  I+RLE++++  LF R++R ++LT EGE
Sbjct: 5   IRELDVFLRVTEETSFSAAARSLDCNPSTVSKLIQRLEDRLRVRLFHRTSRVLKLTREGE 64

Query: 64  IFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPNVTV 123
            FL      L  L+E  + +   + + +G L  ++   L ++ L   I EF+  HP++ V
Sbjct: 65  QFLEGAHRVLDALEEAENGLQNTKTRASGVLRFNSSLLLAQHQLSPVIPEFLERHPHMRV 124

Query: 124 KLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPILHPD 183
           +  L+    D++ N +D++ + G   DS+LVA  +  +    LCASP+YL+     +   
Sbjct: 125 EFVLTASPIDLFENHIDLSFQSGDIPDSSLVARRIA-TTRWTLCASPKYLSKAGIPMTLQ 183

Query: 184 DLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIANKSL 243
           DLQ HNC+ F LA ++ + W L    E  ++ V GN   N  E++   A+ G GI   S 
Sbjct: 184 DLQQHNCMNF-LAGSVRSTWALQDGSEPVALNVNGNIGSNSAELLRAYAIAGVGIVRLSD 242

Query: 244 MDISQDIIDGRLVRILPEWE-SGPVPIYMVCADRRLITPTIRAFQEFIREK 293
           + ++ D+  GRL+R+L +++ +   PIY+V   +R ++P +RAF +F+ EK
Sbjct: 243 VHVAADLAAGRLIRVLEKYQLASEEPIYVVYPSKRNLSPRVRAFLDFLNEK 293