Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  230 bits (587), Expect = 3e-65
 Identities = 119/299 (39%), Positives = 180/299 (60%), Gaps = 4/299 (1%)

Query: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60
           M  L+DL +FV +A  GSF+ AA+   L     + A++RLE ++   LF R+TR +RLT 
Sbjct: 1   MIRLDDLGIFVRSAALGSFTAAAHEADLLPGQAAEAVKRLERELDVRLFARTTRSLRLTA 60

Query: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120
           EGE +L     AL  L+ G D +     QL+G L ++APSDLGRN+LL W+  F   HP 
Sbjct: 61  EGEQYLPSALIALEALRHGRDNLRQESAQLSGTLQVAAPSDLGRNVLLPWLTAFRREHPQ 120

Query: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPIL 180
           + ++L LSD++ D++ +PVDIAIRYG  AD+N +A+ L   N +VL ASPEYLA    + 
Sbjct: 121 LNLRLFLSDQIADLFRDPVDIAIRYGLNADANYIALPLAPWNRKVLVASPEYLARQGTVQ 180

Query: 181 HPDDLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIAN 240
            P DL  H CL +M    +++KW L     T +V V+G   C+D ++  R AV G+GI  
Sbjct: 181 APGDLLEHQCLLYMQQGRVYDKWQLG----TQTVQVRGALLCDDADIARRWAVAGEGITY 236

Query: 241 KSLMDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIREKGCQQRR 299
           KS +D+S D++ GRLV ++ +     +P+ +VC  R+ ++P +R    ++  +  +  R
Sbjct: 237 KSWLDVSDDVLAGRLVVLMQDHPGPAMPLSLVCPHRKQLSPAVRHLHAWLSSRFAELER 295