Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., putative transcriptional regulator LYSR-type (VIMSS) from Escherichia coli BW25113

 Score =  157 bits (396), Expect = 4e-43
 Identities = 95/289 (32%), Positives = 148/289 (51%), Gaps = 2/289 (0%)

Query: 4   LNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTHEGE 63
           LNDL +F+  AR+  F+  A  L ++ A VS  I  LE+ +   L  R+TR + +T EGE
Sbjct: 7   LNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLEQTLNVVLLHRTTRRVTITEEGE 66

Query: 64  IFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPNVTV 123
                 Q  L  + + +D+++  R    G L I +    GR ++   +      +P + +
Sbjct: 67  RIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISSFGFGRQVVAPALLALAKAYPQLEL 126

Query: 124 KLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPILHPD 183
           + D+ DRL D+    VD+ IR G     NL+A  L  +N R+LCASPE++A H    H  
Sbjct: 127 RFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLA-TNYRILCASPEFIAQHGAPKHLT 185

Query: 184 DLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIANKSL 243
           DL    CL     D     W L      H++ V G  + N GE+VH+  + G+GIA +S 
Sbjct: 186 DLSALPCLVIKERDHPFGVWQLRNKEGPHAIKVTGPLSSNHGEIVHQWCLDGQGIALRSW 245

Query: 244 MDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIRE 292
            D+S++I  G LV++LPE+   P  ++ V   R   +  +R   EF+R+
Sbjct: 246 WDVSENIASGHLVQVLPEYYQ-PANVWAVYVSRLATSAKVRITVEFLRQ 293