Pairwise Alignments

Query, 170 a.a., 23S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 162 a.a., SpoU rRNA Methylase family protein from Alteromonas macleodii MIT1002

 Score =  155 bits (392), Expect = 3e-43
 Identities = 79/161 (49%), Positives = 101/161 (62%), Gaps = 1/161 (0%)

Query: 9   IGLHNPKSPTNVGAVMRAAGCYNATQVRYNGTRYARAVKFQTDTQNSHERIGLVEMDDLT 68
           IGL NPK+P NV +++RAAGCY    V Y G RY  A  F  DT+  H+ I  + +DDL 
Sbjct: 3   IGLINPKNPVNVASILRAAGCYGVASVFYTGQRYRFAKDFNADTKAFHKVIPTIGVDDLK 62

Query: 69  AGLDSEVKIVCVELAVGATALPHFTHPEQAIYLFGPEDGSLPQEVVDQAHYVVYVPTHGC 128
             +     +V VEL  GAT LP F HP  A YL GPEDGS+ ++V+    +VVYVPT  C
Sbjct: 63  EVVPEGASVVAVELVEGATPLPLFEHPSNAFYLLGPEDGSIGEDVLSWCDHVVYVPTFSC 122

Query: 129 MNLAATVNVVLYDRLAKSLGEIDDQAQVIANRDNKNRLKVK 169
           MNLAAT NV+LYDRL+KS   +   A +  +RD  N+ K+K
Sbjct: 123 MNLAATANVLLYDRLSKS-DYVSGDALIRQSRDTNNKSKIK 162