Pairwise Alignments

Query, 784 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 180 a.a., Putative Ton-B dependent hemine receptor from Variovorax sp. SCN45

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 24/162 (14%)

Query: 141 RGYQGVSDRTYIDTDLLSSLTVNKGATIESSPYASGAVGGVVNATTLGIKDIIKDDQAFG 200
           RGY G ++R YID +L+  + V KG  +  +   + ++GG V   TL + DI+K  + FG
Sbjct: 4   RGYNGANNRNYIDPNLIGGIQVIKGPNLARN--VNSSIGGAVVVNTLDVADILKPGERFG 61

Query: 201 VVLKARANNH---NRTPDVS--GDYSEQGQYALDERGEH-----------------SAFK 238
              K  ++++    R P +S   DY     +  +    +                  A  
Sbjct: 62  GEFKLESSDNAVDPRLPKLSTGQDYRSIPGFPSNPTATYYDPTLYKPVRASGGNDLIAGD 121

Query: 239 HGSLMLGLGYQAESFNTVLAYSKRSKGNHFAGKKGYEEYQEP 280
             ++ L LG + E F+ + AY+ R KGNHF+G +G   Y  P
Sbjct: 122 DHAMRLALGLREERFDLLAAYAYRKKGNHFSGDEGGGFYSRP 163