Pairwise Alignments

Query, 784 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., TonB-dependent hemin, ferrichrome receptor from Sphingobium sp. HT1-2

 Score = 66.2 bits (160), Expect = 6e-15
 Identities = 130/587 (22%), Positives = 213/587 (36%), Gaps = 109/587 (18%)

Query: 80  RSDLDKVRGIANADIFSGITSVQSNNMHNEAGALDIG--IRGV-----QGEGRVPIFIDG 132
           + D+D+++     D+  G+  V   N+    G L  G  IRG+       + R+ + +DG
Sbjct: 65  QEDIDQLQATTIGDLLEGMPGV---NVQGGVGQLGQGFNIRGMGTAIGDSDNRILMTVDG 121

Query: 133 SLQSTHTSRGYQGVSDRTYIDTDLLSSLTVNKGATIESSPYASGAVGGVVNATTLGIKDI 192
             +     R         + + +L   + V +G    S+ Y +GA+ GV+N TT    D 
Sbjct: 122 VTKFYEQYR-----MGAFFSEPELYKRVEVLRGPA-SSTLYGAGALAGVINFTTKDASDF 175

Query: 193 IKDDQAFGVVLKARANNHNRTPDVSGDYSEQGQYALDERGEHSAFKHGSLMLGLGYQAES 252
           ++D     V LK     + +   +SG                                  
Sbjct: 176 LRDGDKLAVRLKGATETNAQGHTLSG---------------------------------- 201

Query: 253 FNTVLAYSKRSKGNHFAGKKGYEEYQEPVVGQGQEVVNTSFESDSWLFKLASDTGTAHNA 312
               +  ++   G    G   Y    +   G G  V  ++ ESDSWL K     G     
Sbjct: 202 ----IVATEPVDGVELLGSYNYRRTDDYKSGNGDTVAASATESDSWLVKGRVAIGG---- 253

Query: 313 DFNYRHHAQKAGEVLMAYWYKSSEDWEGNPYPDGKDRMPQW---GLGTAKVNTYSANYYY 369
             N +H          A W  S +DW  +  P   D++       L   +V+  +A   Y
Sbjct: 254 --NKKH----------AIW-ASYQDWISDA-PQVYDQISAATGSSLMRRRVHDKTAVLGY 299

Query: 370 QPDH---PWLNLNANFWYTEADLAQYNGLWALGTNAEQYFHAYHNDRSGLSLTNETLLT- 425
             D     + N+ A   Y+ + + Q    + LG N E    +Y + ++ +  T+E  +  
Sbjct: 300 VNDFNGSKFFNVEAQVAYSLSKVHQTETTF-LGANLEYSDFSYESWQAKVQNTSEFAMGG 358

Query: 426 QWPVRLNYGLA-QQNERLSPEEDGQTRFTKTV-TSRHGKRTAQNLFANADIDYSP-LRVQ 482
            W   L  G      ER +P  +     T    T   G      LF   +I +S  L + 
Sbjct: 359 DWTTFLILGGQWSTQERRNPRVNFDGTVTPGAGTHPEGDMDRYGLFGQLEIVWSDKLTIM 418

Query: 483 LGLNLHNAKSTDYQTK----------QQLDYKEKLDLLSEFTYALTPSTQLFLKSSRTYR 532
             + +   + T   T           +      KL  L    Y +TP   LF   +RT R
Sbjct: 419 PDVRVDWTRLTPGDTVVGGTVLTDKVKDSGVSPKLAAL----YNITPWFGLFGSVARTVR 474

Query: 533 MPSLYETTLSNEVFSYNPYNPIKPEQAWNNEVGVQFMASNSVLQDDRLNLSVSYFRNSIK 592
           MP++ E    +     NP   +KPE++ N E G      + + ++DR     + F+N +K
Sbjct: 475 MPNIDEIFTRSATRPNNP--DLKPEKSDNYEAGFTLSFDDMLGKNDRFRAKTTLFQNDVK 532

Query: 593 DFI-SGGRLAKTPGMSEWQANFTFTNYDKLQLSGWELGAHYQYAWLY 638
           D I +    A TP          F N ++ +  G EL A Y     Y
Sbjct: 533 DLIVNVSAAAGTP---------YFQNINRSRFKGIELEAEYGMGGFY 570