Pairwise Alignments

Query, 784 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 830 a.a., TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  176 bits (447), Expect = 4e-48
 Identities = 189/771 (24%), Positives = 329/771 (42%), Gaps = 102/771 (13%)

Query: 46  VVLSSVVQAQENTEQAVDETVTVHGQSILTDQRTRSDLDKVRGIANADIFSGITSVQSNN 105
           V L +V+   E  EQA+    TV+  S       R +LD++   + +DIF G+  V + N
Sbjct: 126 VELPTVLVTAER-EQALPNAATVNTVS-------REELDRLPPTSTSDIFKGVPGVTAAN 177

Query: 106 MHNEAGALDIGIRGVQGEGRVPIFIDGSLQSTHTSRGYQGVSDRTYIDTDLLSSLTVNKG 165
             N A + D+ +RG QG+ RV + +DG+  +++TS+ Y G ++  Y+D DL+S + V KG
Sbjct: 178 ARNGA-SFDLNVRGQQGD-RVKVLVDGTQSTSNTSKSYGGENNHNYVDPDLVSGIVVEKG 235

Query: 166 ATIESSPYASGAVGGVVNATTLGIKDIIKDDQAFGVVLKARANNHNRTPDVSGDYSEQGQ 225
               S P+ +G  GGVVN +TL   D+++D + +G  L+ R    N     +G  +    
Sbjct: 236 P--NSGPHGAGTGGGVVNLSTLTADDLLRDGKNWG--LRLRGGWANNASPGTGFRTYNNT 291

Query: 226 YALDERGEHSAFKHGSLMLGLGYQAESFNTVLAYSKRSKGNHFAGKKGYE---------E 276
            A+D R      K GS+           + V  +S+R   N++AG  G           E
Sbjct: 292 GAIDVR-TPDRNKSGSVAGAWRALDGKLDLVAVHSERRSSNYYAGSSGSPTFSNHGPAGE 350

Query: 277 YQEPV--VGQGQEVVNTSFESDSWLFKLASDTGTAHNADFNYRHHAQKAGEV-LMAYWYK 333
            +EP+      QEV NTS ++ S LFK           + ++     K GE  + A+ Y 
Sbjct: 351 TREPISLYKPDQEVFNTSQDTKSALFKARLQLPADQWVELSHNQLESKFGESRITAFDY- 409

Query: 334 SSEDWEGNPYPDGKDRMPQWGLGTAKVNTYSANYYYQP-DHPWLNLNANFWYTEADLAQY 392
                           + Q  L   +  T    Y ++P  +P  NL  N W+ + D    
Sbjct: 410 ---------------NIEQKLLSEVEKTTSLVRYGWKPAANPLWNLRLNLWHVKLDELHP 454

Query: 393 NGLWAL-GTNAEQYFHAYHN---DRSGLSLTNETLLTQWPVRLNYGLAQQNERLSPEEDG 448
              + + GT   Q   A+++   D +G+ LT           L YG + Q+E+ +     
Sbjct: 455 EITYGVSGTTDTQGLEAWNSSVFDLAGVGLT-----------LAYGGSLQHEKTT----- 498

Query: 449 QTRFTKTVTSRHGKRTAQNLFANADIDYSPLRVQLGLNLHNAKSTDYQTKQQL------- 501
                  +T   G+R   +LF  A++ ++   V L + L         T   +       
Sbjct: 499 ----GLGITEPRGEREFSSLFVRANVQFNE-HVALDVGLRRESYASEGTGSFISPIPGQA 553

Query: 502 -------DYKEKLDLLSEFTYALTPSTQLFLKSSRTYRMPSLYETTLSNEVFSYNPYNPI 554
                  D  ++++     T     S   F+++S  +R P+  E  L+   + +N  + +
Sbjct: 554 RIPFAINDGHDRVNPSVGLTIQPIESLAFFVRTSEGWRPPTPKEVGLT---YGHN-RSVL 609

Query: 555 KPEQAWNNEVGVQFMASNSVLQDDRLNLSVSYFRNSIKDFISGGRLAKTPGMSEWQANFT 614
           +PE   + EVG ++   N   ++D +N+  + F N    +++   L+   G     + + 
Sbjct: 610 QPEVTESTEVGARWNGKNVWAREDAVNVGFTLFNNRHTGYLA-RHLSSGTG-----SPYY 663

Query: 615 FTNYDKLQLSGWELGAHYQYAWLYTHFAATLYSETKICSVQQAQYAESDTCNSLGFAWGL 674
           +TN D  +  G EL A Y     +  +    + + + C        ++   N      GL
Sbjct: 664 YTNIDGARFKGVELSARYDNGAFFGSYGLNHFEKAQFCGYLAPGCKDTFDANLGTDMAGL 723

Query: 675 TPTRIPPKQNLYLNVGTKFFNDTLDSGVKVSYHSGKSNPSDWLAGTAANPILEIPSDYTI 734
               +PPK+   L +GT+     L  G++  + +G +      AG   N        Y  
Sbjct: 724 V---LPPKRTQTLTLGTRLLERRLTLGLRAHFVTGSAGTLLTSAGQTVNTGWRPHEIY-- 778

Query: 735 DLYSQYELNANTQLFFAINNVTDRYQVR--PGSVVSMPDPGRT--ITLGFE 781
           DL+  + +  +  L F++ N+ DRY V     S V++P PGRT  +TL ++
Sbjct: 779 DLFGSWRIGRHLDLNFSVENLRDRYYVEAMTSSAVAIPSPGRTAKVTLTYQ 829