Pairwise Alignments

Query, 784 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Brucella heme uptake protein A from Alteromonas macleodii MIT1002

 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 157/754 (20%), Positives = 282/754 (37%), Gaps = 148/754 (19%)

Query: 45  PVVLSSVVQAQENTEQAVDETVTVHGQSILTDQRTRSDLDKVRGIANADIFSGITSVQSN 104
           PVV +  +++Q    ++++    V   + L+   T  D+++ +    AD+F    SV   
Sbjct: 16  PVVFAQSLESQNEETKSIERVAVVGAATNLSI--TAEDIEQFQANDLADVFRESPSVSVG 73

Query: 105 NMHNEAGALDIGIRGVQGEGRVPIFIDGSLQSTHTSRGYQGVSDRTYIDTDLLSSLTVNK 164
              +   A  I IRG++ +  + + +DG+ Q T T   + G   R  +D DLL  + V  
Sbjct: 74  G--SVGVAQKIFIRGLE-DAYLNVTVDGA-QQTSTLFHHIG---RVTLDPDLLKQIDVQA 126

Query: 165 GATIESSPYASGAVGGVVNATTLGIKDIIKDDQAFGVVLKARANNHNRTPDVSGDYSEQG 224
           GA   +S    GA+GG +   T   +D+++ D+ FG  +KA                   
Sbjct: 127 GAGEATS--GPGAIGGSIRFKTKDAQDLLRGDEQFGGRVKA------------------- 165

Query: 225 QYALDERGEHSAFKHGSLMLGLGYQAESFNTVLAYSKRSKGNHFAGKKGYEEYQEPVVGQ 284
            Y  +E   +S   +G L       ++S+  +  YS   + N       +E+      G 
Sbjct: 166 SYFSNEGTRYSGSLYGKL-------SDSWGLLGYYSTVDRDN-------FED------GD 205

Query: 285 GQEVVNTSFESDSWLFKLASDTGTAHNADFNY----RHHAQKAGEVLMAYWYKSSEDW-- 338
           G EV+ T+ + D    K      + + AD  Y         + GE      + +  +W  
Sbjct: 206 GNEVLGTAADQDLMFLK-----ASGYIADNQYLSISAEQRDEEGE------FSARPNWVV 254

Query: 339 -EGNP-YPDGKDRMPQWGLGTAKVNTYSANYYYQPDHPWLNLNANFWYTEADLAQYNGLW 396
            EG P YP   +R           +TY ANY +  DH  L       + EA   Q +  +
Sbjct: 255 LEGAPLYPSEAER-----------DTYVANYRF--DHSAL------VFLEATAYQTSSSF 295

Query: 397 ALGTNAEQYFHAYHNDRSGLSLTNETLLTQWPVRLNYGLAQQNER------LSPEEDGQT 450
             G    ++      D  G  + N T ++       YG+  + +       + P ++ + 
Sbjct: 296 RGG----RFDFLSDIDTYGFDIRNTTDISNHV--FTYGIDYRKDEVESGPGVGPVQNAEE 349

Query: 451 RFTKTVTSRHGKRTAQNLFANADIDYSPLRVQLGLNLHNAKSTDYQTKQQLDYKEKLDLL 510
                + ++        L  +  + Y     Q  + + +   T    +       +L   
Sbjct: 350 GSVMGIYAQAHSNITPELLLSYGVRYDDFDFQQQILIDDYYGTPVTDEPSGLDDNELSFN 409

Query: 511 SEFTYALTPSTQLFLKSSRTYRMPSLYE-TTLSNEVFSYNPY----NPIKPEQAWNNEVG 565
               Y LT +  L L  +   R   + +  TL   ++         + + PE   N E  
Sbjct: 410 VGLEYQLTEAWTLGLGYAEAARGKQIGDGFTLDEYLYDGEDVPVVASDVVPETVTNIEAS 469

Query: 566 VQFMASNSVLQDDRLNLSVSYFRNSIKDFISGGRLAKTPGMSEWQANFTFTNYDKLQLSG 625
           +++ A+N       LN  +S + ++I D +  G          +Q N  F N   L+ SG
Sbjct: 470 IEYSANN-------LNARLSAYESTIDDVLFSG----------YQGNSVFNNIGDLESSG 512

Query: 626 WELGAHYQYAWLYTHFAAT-----------LYSETKICSVQQAQYAESDTCNSLGFAWGL 674
            E    Y++  +  +F  +           LYS     S+    Y      NS G  W L
Sbjct: 513 VEFNLAYRWDSVDVYFGFSSVDVELMPREDLYS-VPYNSIDINGYEFVGLGNSRGDTWVL 571

Query: 675 TPTRIPPKQNLYLNVGTKFFNDTLDSGVKV-SYHSGKSNPSDWLAGTAANPILEIPSDYT 733
                       ++VG   FN T+   + + + H    N      G   +      +DYT
Sbjct: 572 GADYTVTAD---ISVG---FNITMVDDINIDTLHQALEN------GWTDSLYSLNKADYT 619

Query: 734 -IDLYSQYELNANTQLFFAINNVTDRYQVRPGSV 766
            +D+Y ++E+  + +L  A+ N+ D   +   SV
Sbjct: 620 LVDIYGEWEVTNDLRLNLAVTNLFDEAYIDHSSV 653