Pairwise Alignments

Query, 136 a.a., large conductance mechanosensitive channel protein MscL from Vibrio cholerae E7946 ATCC 55056

Subject, 142 a.a., large conductance mechanosensitive channel protein from Agrobacterium fabrum C58

 Score =  117 bits (292), Expect = 9e-32
 Identities = 67/144 (46%), Positives = 97/144 (67%), Gaps = 15/144 (10%)

Query: 3   LLKEFKAFASRGNVIDMAVGIIIGAAFGKIVSSFVADIIMPPIGIILGGVNFSDLSFVLL 62
           +L EFK F +RGNV+D+AVG+IIGAAF KIV S V D+IMP +G I GG +FS+  F+ L
Sbjct: 1   MLNEFKTFIARGNVMDLAVGVIIGAAFSKIVDSVVNDLIMPIVGAIFGGFDFSNY-FLPL 59

Query: 63  AAQGDAPAV--------VIAYGKFIQTVVDFTIIAFAIFMGLKAINSL-----KRKEEEA 109
           ++  +A ++        V AYG F+  +++F I+A+ IF+ +K +N L     ++K EE 
Sbjct: 60  SSNVNATSLAAAREQGAVFAYGNFLTVLINFLILAWIIFLMVKGVNKLRDSVDRKKIEEK 119

Query: 110 PKAPPAPTKDQELLSEIRDLLKAQ 133
           P A P P +D +LL+EIRDLLK +
Sbjct: 120 PDAAP-PPEDVKLLTEIRDLLKTR 142