Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., Spermidine/putrescine transport system permease protein PotB from Xanthobacter sp. DMC5

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 12/273 (4%)

Query: 28  LNVARTFSVRILPHWSRDSLILSTTLLILLSLMLLFIVAPLAAMLLKSVQ--NGQGEFVG 85
           L ++ T   R+ P  +  +L+L   + ++ ++  L+ V  L  M  +  Q     G    
Sbjct: 4   LALSHTEPRRLGPLGTASALLLP--IAVVNAIGFLWPVVNLLKMSFREAQASGALGAGYN 61

Query: 86  LAYFAQYFSSAALWQSLRNTLVLGISVTAIVGILAFGYAYALTRSCMPGKHLFRVLGSAP 145
           L  +    + +   + + N++ + + +T +  I ++  A  L RS    + +  VL  AP
Sbjct: 62  LDTWTNALTDSFTLELITNSVGVSLLITVLTLIASYPIALYLHRSTGTWRTMLMVLVVAP 121

Query: 146 ILAPSLLPAISLIFLFGNQGMLKSWLGG-------ESIYGGLGITLGLIFWTFPHALMIL 198
           +L  +++     I +  ++G++ + L           ++   G+ +GL     P+ ++ L
Sbjct: 122 LLTSAVVRTYGWIAILSDRGLVANALMALGMAEPPRLMFNLTGVVIGLTEILMPYMILAL 181

Query: 199 TTSLSTSDARLYEAARALKTSPIKTFFIVTLPAAKYGLISALIVVFTLVVCDFGVPKVIG 258
            +     D RL EAA  L  SP+KTF+ V LP    G+    ++ F L +  F  PK++G
Sbjct: 182 LSGFGRLDPRLEEAALTLGASPLKTFWRVVLPLTAPGMALGGLLCFVLAISSFVTPKLLG 241

Query: 259 GS-YNVLATDIFKQVVGQQNFAMGAVTSIVLLL 290
           G    +LAT+I+ Q +   N+ + A  S+++L+
Sbjct: 242 GGRVFLLATEIYDQAIVTLNWPLAAALSMIVLV 274



 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 59/270 (21%), Positives = 106/270 (39%), Gaps = 45/270 (16%)

Query: 339 AIVAVLATAVYGSLVTFWPWNTALTLKHYQFAETSAYG-------WSPYF-NSLTLASLT 390
           A   +L  AV  ++   WP    L +   +   + A G       W+    +S TL  +T
Sbjct: 20  ASALLLPIAVVNAIGFLWPVVNLLKMSFREAQASGALGAGYNLDTWTNALTDSFTLELIT 79

Query: 391 ALCG-----TVIIFLGAYSIEK--GRVFALLRQAMQMLSMVPMAVPGLVLGLGYIFFFNH 443
              G     TV+  + +Y I     R     R  + +L + P+    +V   G+I   + 
Sbjct: 80  NSVGVSLLITVLTLIASYPIALYLHRSTGTWRTMLMVLVVAPLLTSAVVRTYGWIAILSD 139

Query: 444 ASNPLNGLYG-GM------------LLLVINTVVHYYTVGHMTAVTALKQLPPELEATAA 490
                N L   GM            +++ +  ++  Y +  +  ++   +L P LE  A 
Sbjct: 140 RGLVANALMALGMAEPPRLMFNLTGVVIGLTEILMPYMI--LALLSGFGRLDPRLEEAAL 197

Query: 491 SIKLPQYRLLWKVTLPVSLPA---------VLDIASYLFINALTTTSAVVFLYSTDTVPA 541
           ++     +  W+V LP++ P          VL I+S  F+         VFL +T+    
Sbjct: 198 TLGASPLKTFWRVVLPLTAPGMALGGLLCFVLAISS--FVTPKLLGGGRVFLLATEIYDQ 255

Query: 542 SVAVLNMDDAGQTGAAAAMAVMIMLSAALA 571
           ++  LN   A    AA +M V+++   +LA
Sbjct: 256 AIVTLNWPLA----AALSMIVLVVFGISLA 281