Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 21/265 (7%)

Query: 45  DSLILSTTLLILLSLMLLFIVAPLAAMLLKSVQNGQGEFVG-------LAYFAQYFSSAA 97
           D   +S  L I   LM LF++APL  +L  S      +F+        + ++   F+++ 
Sbjct: 2   DERPVSPALKIAAGLMFLFLLAPLLVVLPISFSGD--DFMAFPPSSWSVKWYGAIFANSV 59

Query: 98  LWQSLRNTLVLGISVTAIVGILAFGYAYALTRSCMPGKHLFRVLGSAPILAPSLLPAISL 157
           +  +   +L L   VTA+   +    AYAL R   PG      L SAP+L P+++  ++L
Sbjct: 60  MMNAFWISLALAFVVTALSLGIGLPAAYALVRLKPPGAEALSNLFSAPLLLPTIVLGLAL 119

Query: 158 IFLFGNQGMLKSWLGGESIYGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALK 217
           + +F   G++ S+          G+    +  T P+A+ +L+T+L+     + EAA  L 
Sbjct: 120 LLVFAPMGLIGSF---------QGLVAAHLIVTLPYAVRVLSTALANLPLTVEEAAGMLG 170

Query: 218 TSPIKTFFIVTLPAAKYGLISALIVVFTLVVCDFGVPKVI--GGSYNVLATDIFKQVVGQ 275
             P+  FF VTLP  + GL+S   + F LV  D  V  +   G     L   ++  V  Q
Sbjct: 171 ARPLTVFFRVTLPMMRSGLVSTTALCF-LVSFDEVVLSLFMTGPRLQTLPVAMYNHVDQQ 229

Query: 276 QNFAMGAVTSIVLLLPAVFAFIADR 300
            +    A++ ++++L      + DR
Sbjct: 230 ADPMAAAISVLLVVLTLAVVLVVDR 254



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 10/265 (3%)

Query: 318 QPAPHRLRDGLCLLYCVLICVAIVAVLATAVYGSLVTFWPWNTALTLKHYQFAETSAYGW 377
           +P    L+    L++  L+   +V +  +      + F P  ++ ++K Y     ++   
Sbjct: 4   RPVSPALKIAAGLMFLFLLAPLLVVLPISFSGDDFMAFPP--SSWSVKWYGAIFANSVMM 61

Query: 378 SPYFNSLTLASLTALCGTVIIFLGAYSIEKGRVFALLRQAMQMLSMVPMAVPGLVLGLGY 437
           + ++ SL LA +       I    AY++   R+     +A+  L   P+ +P +VLGL  
Sbjct: 62  NAFWISLALAFVVTALSLGIGLPAAYALV--RLKPPGAEALSNLFSAPLLLPTIVLGLAL 119

Query: 438 IFFFNHASNPLNGLYGGMLLLVINTVVHYYTVGHMTAVTALKQLPPELEATAASIKLPQY 497
           +  F     P+ GL G    LV   ++           TAL  LP  +E  A  +     
Sbjct: 120 LLVFA----PM-GLIGSFQGLVAAHLIVTLPYAVRVLSTALANLPLTVEEAAGMLGARPL 174

Query: 498 RLLWKVTLPVSLPAVLDIASYLFINALTTTSAVVFLYSTDTVPASVAVLNMDDAGQTGAA 557
            + ++VTLP+    ++   +  F+ +       +F+         VA+ N  D      A
Sbjct: 175 TVFFRVTLPMMRSGLVSTTALCFLVSFDEVVLSLFMTGPRLQTLPVAMYNHVDQQADPMA 234

Query: 558 AAMAVMIMLSAALAKLLHVGLEFGL 582
           AA++V++++   LA +L V    GL
Sbjct: 235 AAISVLLVV-LTLAVVLVVDRTAGL 258