Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 70.9 bits (172), Expect = 7e-17
 Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 12/198 (6%)

Query: 112 VTAIVG-ILAFGYAYALTRSCMPG-KHLFRVLGSAPILAPSLLPAISLIFLFGNQGMLKS 169
           +TA++  ++A+  AYAL R+     K    +    P+    ++   S I + GN G + S
Sbjct: 72  LTALITLVVAYPLAYALVRTRNVALKSFLLITAVTPLFLGEVVRTYSWIIVLGNTGFINS 131

Query: 170 WLGG--------ESIYGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALKTSPI 221
            L G        + ++   G+   L+  T P  +++L+ +LS  D    +AA +L   P+
Sbjct: 132 VLKGVGLIDRPVQMMFTTFGVVTALVHVTLPVMVIMLSAALSHIDRDYEKAATSLGAGPV 191

Query: 222 KTFFIVTLPAAKYGLISALIVVFTLVVCDFGVPKVI-GGSYNVLATDIFKQVVGQQNFAM 280
           K F  VTLP +  G+++ +   F      F  P++I GG  ++++T +++      NF  
Sbjct: 192 KAFLTVTLPLSMPGVVAGVSTAFAWTFSAFATPQMIGGGKVSMISTLVYQLGFASFNFPF 251

Query: 281 GAVTSIVLLLPAVFAFIA 298
            A  S V  L   FA +A
Sbjct: 252 AAALS-VTGLALTFAVLA 268



 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 29/269 (10%)

Query: 335 LICVAIVAVLATAVYGSLVTFWPWNT---ALTLKHYQFAETSAYGWSPYFNSLTLASLTA 391
           L  +A  A LA  +  +   + P +     LTL ++ FA         +  ++ +  LTA
Sbjct: 16  LAAIASAAALAAILQYAFRAYVPGSLNPGGLTLDNF-FALLRPLYAQVFIQTVWICLLTA 74

Query: 392 LCGTVIIFLGAYSIEKGRVFALLRQAMQMLSMVPMAVPGLVLGLGYIFFFNHASNPLNGL 451
           L   V+ +  AY++ + R  AL +  + + ++ P+ +  +V    +I    +    +N +
Sbjct: 75  LITLVVAYPLAYALVRTRNVAL-KSFLLITAVTPLFLGEVVRTYSWIIVLGNTGF-INSV 132

Query: 452 YGGMLLLVINTVVHYYTVGHMTAVT-------------ALKQLPPELEATAASIKLPQYR 498
             G+ L+     + + T G +TA+              AL  +  + E  A S+     +
Sbjct: 133 LKGVGLIDRPVQMMFTTFGVVTALVHVTLPVMVIMLSAALSHIDRDYEKAATSLGAGPVK 192

Query: 499 LLWKVTLPVSLPAVLDIASYLF---INALTTTSAV----VFLYSTDTVPASVAVLNMDDA 551
               VTLP+S+P V+   S  F    +A  T   +    V + ST       A  N   A
Sbjct: 193 AFLTVTLPLSMPGVVAGVSTAFAWTFSAFATPQMIGGGKVSMISTLVYQLGFASFNFPFA 252

Query: 552 GQ---TGAAAAMAVMIMLSAALAKLLHVG 577
                TG A   AV+ M   A+  L  +G
Sbjct: 253 AALSVTGLALTFAVLAMAKQAIKPLEKIG 281



 Score = 24.3 bits (51), Expect = 0.007
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 3/76 (3%)

Query: 145 PILAPSLLPAISLIFLFGNQGMLKSWL---GGESIYGGLGITLGLIFWTFPHALMILTTS 201
           P+  P ++  +S  F +         +   G  S+   L   LG   + FP A  +  T 
Sbjct: 200 PLSMPGVVAGVSTAFAWTFSAFATPQMIGGGKVSMISTLVYQLGFASFNFPFAAALSVTG 259

Query: 202 LSTSDARLYEAARALK 217
           L+ + A L  A +A+K
Sbjct: 260 LALTFAVLAMAKQAIK 275