Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., polyamine ABC transporter permease from Pseudomonas simiae WCS417

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 18/277 (6%)

Query: 40  PHWSRDSLILSTTLLILLSLMLLFIVAPLAAMLLKSVQNGQG-----EFVGLAYFAQYFS 94
           P+ S    +   +L IL  L+LLF++ P+  ++  S  +G       +   L ++  +F+
Sbjct: 4   PYMSPVERVWFYSLRILCGLILLFLILPVLVIIPLSFNSGSFLVYPLQGFSLHWYQDFFA 63

Query: 95  SAALWQSLRNTLVLGISVTAIVGILAFGYAYALTRSCMPGKHLFRVLGSAPILAPSLLPA 154
           SA   ++L+N++++  + T +  +     A  LTR   PGK L   L  +P++ P ++  
Sbjct: 64  SAEWMRALKNSVIVAPAATVLAMVFGTLAAIGLTRGNFPGKALVMALVISPMVVPVVIIG 123

Query: 155 ISLIFLFGNQGMLKSWLGGESIYGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAAR 214
           ++    F   G+  S+     ++  LG+         P  ++ ++ +L   +  L  AA 
Sbjct: 124 VASYLFFAPLGLGNSFFSLIVVHAVLGV---------PFVIITVSATLQGFNHNLVRAAA 174

Query: 215 ALKTSPIKTFFIVTLPAAKYGLISALIVVFTLVVCDFGVPKVIGG-SYNVLATDIFKQVV 273
           +L  SP+  F  VTLP    G+IS  +  F+    +  V   + G     L   +F  + 
Sbjct: 175 SLGASPLTAFRRVTLPLIAPGVISGALFAFSTSFDEVVVTLFLAGPEQATLPRQMFSGI- 233

Query: 274 GQQNFAMGAVTSIVLLLP-AVFAFIADRWVQKKQQSL 309
            ++N +     +  LL+  +V   +   W++ + + L
Sbjct: 234 -RENLSPTIAAAATLLIAFSVLLLLTLEWLRGRSEKL 269



 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 69/270 (25%), Positives = 111/270 (41%), Gaps = 19/270 (7%)

Query: 323 RLRDGLCLLYCVLICVAIVAVLATAVYGSLVTFWPWNTALTLKHYQFAETSAYGWSPYFN 382
           R+  GL LL+ +L  + I+ +   +  GS + + P     +L  YQ    SA       N
Sbjct: 18  RILCGLILLFLILPVLVIIPLSFNS--GSFLVY-PLQ-GFSLHWYQDFFASAEWMRALKN 73

Query: 383 SLTLASLTALCGTVIIFLGAYSIEKGRVFALLRQAMQMLSMVPMAVPGLVLGLGYIFFFN 442
           S+ +A    +   V   L A  + +G      +  +  L + PM VP +++G+    FF 
Sbjct: 74  SVIVAPAATVLAMVFGTLAAIGLTRGNFPG--KALVMALVISPMVVPVVIIGVASYLFFA 131

Query: 443 HASNPLNGLYGGMLLLVINTVVHYYTVGHMTAVTALKQLPPELEATAASIKLPQYRLLWK 502
               PL GL      L++   V       +T    L+     L   AAS+         +
Sbjct: 132 ----PL-GLGNSFFSLIVVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRR 186

Query: 503 VTLPVSLPAVLDIASYLFINALTTTSAVVFLYSTD--TVPASVAVLNMDDAGQTGAAAAM 560
           VTLP+  P V+  A + F  +       +FL   +  T+P  +     ++   T AAAA 
Sbjct: 187 VTLPLIAPGVISGALFAFSTSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAA- 245

Query: 561 AVMIMLSAALAKLLHVGLEFGLFGRLQAWR 590
                L  A + LL + LE+ L GR +  R
Sbjct: 246 ----TLLIAFSVLLLLTLEW-LRGRSEKLR 270